Shewanella dokdonensis: KHX94_18310
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Entry
KHX94_18310 CDS
T07469
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
sdk
Shewanella dokdonensis
Pathway
sdk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KHX94_18310 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdk03400
]
KHX94_18310 (ruvA)
DNA repair and recombination proteins [BR:
sdk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KHX94_18310 (ruvA)
RecFOR pathway proteins
KHX94_18310 (ruvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
5_3_exonuc
Transposase_20
DUF3837
HTH_78
Motif
Other DBs
NCBI-ProteinID:
QVK23041
UniProt:
A0ABX8DEH5
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All DBs
Position
3816754..3817368
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AA seq
204 aa
AA seq
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MIGRLHGILLEKQAPDVLLDVQGVGYELQMPLTSFYELPELNQTATIYTHFVVREDAQLL
YGFITKQERSLFRLLIKANGVGPKLALTILSGMTAQEFVNCVERDDIATLVKLPGVGKKT
AERLLVEMRDKLKSLLETASGNEREFVLKSNYTPTTVNNAEDDAMAALLTLGYKPAQASK
AVSAAFEEGMDSETLIKAALKSML
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgattgggcggttacacggtattctgctagaaaaacaggctccagatgtgctgttggat
gtgcagggcgtaggctatgagttgcagatgccactcaccagtttttacgaactgccagag
ttgaaccaaacggcaaccatttacacccattttgtggtgcgggaagacgcccaactgcta
tatggttttattactaaacaggagcggtcactgttccgattattgataaaagccaatggt
gttggcccgaaactggcgctgaccattctttccggcatgaccgcgcaagagtttgtcaat
tgtgtggaacgcgacgatattgctactttggttaaattgcctggagttggtaaaaaaact
gccgagcggttactggtggagatgcgtgacaaactcaagagcctgctggagactgccagc
ggcaatgaacgcgagtttgtgctcaagtccaactacacaccgacaacggtcaacaacgcc
gaagatgatgccatggccgccttgctgacattgggttacaaaccagcacaggccagtaaa
gcggtgtcagcagcatttgaagaggggatggattctgaaaccctcatcaaagccgctctt
aaatcgatgttataa
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