Shewanella dokdonensis: KHX94_18625
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Entry
KHX94_18625 CDS
T07469
Symbol
ttcA
Name
(GenBank) tRNA 2-thiocytidine(32) synthetase TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdk03016
]
KHX94_18625 (ttcA)
Transfer RNA biogenesis [BR:
sdk03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
KHX94_18625 (ttcA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
GSHPx
Motif
Other DBs
NCBI-ProteinID:
QVK23083
LinkDB
All DBs
Position
complement(3879609..3880556)
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AA seq
315 aa
AA seq
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MADIAELDKKQITRLNKLQKRLRREVGSAIADYNMIEEGDRVMCCLSGGKDSYTMLDILL
NLQQRAPVNFDIVAVNLDQKQPGFPEAILPAYLDSLNIPYHILEKDTYSIVKEKVPEGKT
TCSLCSRLRRGTLYGFAQRIGATKIALGHHRDDIIETLFLNMFYGGKMKAMPPKLLSDDG
ANVVIRPLAYSREKDIAEYAKLKRFPIIPCNLCGSQENLKRAEIKSMLKTWDKQFPGRIE
TIFTAMQNTAPSQGVDRNAFDFVSLQQDPNAEVSGDVADADLPAFDFMDVENRGHIDLDK
AAKHQRIEVVGIYTP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatagctgaactcgataaaaagcagataactcgtctcaacaaattacaaaag
cgcttgcgccgcgaggtggggagcgccattgccgactacaacatgattgaagaaggcgat
cgggtaatgtgttgtctatctggtggtaaagatagttacactatgctggatattctgctt
aacctacagcagcgggctccggtgaattttgatattgttgctgtcaatctggatcagaaa
cagcctggttttccagaagccatactgccagcctacttggatagtctgaatattccttat
catattctcgaaaaagacacttattccatcgtgaaggaaaaggttcctgaagggaaaacc
acctgctctttatgctcgcgcttacgtagaggtacgctctatggttttgcgcagcgaatt
ggggcaaccaaaatagcgttgggacatcatcgggatgacatcattgaaacgctgtttctc
aatatgttctatggcggcaaaatgaaggcaatgccgcccaagctgttatcagatgacggt
gccaatgtggtgatccgtcccctagcctattcccgagaaaaagatattgccgaatatgcc
aagctgaaacgttttcctatcattccttgtaatctgtgtggttcccaggaaaatctcaag
cgtgccgaaatcaaaagtatgctcaaaacttgggataagcagttccccggtcgcattgaa
actatctttaccgcaatgcagaacaccgcaccatcacaaggggtagatcgtaacgcattt
gactttgtatcgttgcaacaagatcccaatgcggaagtatcgggagatgtcgccgatgca
gatttgccggcatttgattttatggatgtagaaaaccgcgggcatattgacctagataag
gctgccaaacatcaacgcattgaagttgttggcatttacacgccatag
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