Shewanella dokdonensis: KHX94_18755
Help
Entry
KHX94_18755 CDS
T07469
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KHX94_18755 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdk01007
]
KHX94_18755 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdk03016
]
KHX94_18755 (serS)
Enzymes [BR:
sdk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
KHX94_18755 (serS)
Amino acid related enzymes [BR:
sdk01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
KHX94_18755 (serS)
Transfer RNA biogenesis [BR:
sdk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
KHX94_18755 (serS)
Prokaryotic type
KHX94_18755 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FlgN
Dynamitin
ATG17_like
SPC25_N
End3
EzrA
ERM_helical
Mce4_CUP1
TMF_TATA_bd
Kazrin
COG6_N
PI_PP_I
DRC7_C
FapA
Phage_scaffold
NET2A_C
Motif
Other DBs
NCBI-ProteinID:
QVK23105
UniProt:
A0ABX8DFE5
LinkDB
All DBs
Position
complement(3896118..3897404)
Genome browser
AA seq
428 aa
AA seq
DB search
MLDPKYLRNELATTAERLATRGFILDVDRLTRLEEKRKALQVETEELQASRNAMSKSIGQ
AKAKGEDVSEIMAQVNDLGSKLDTKKQELSQLLDELNAIAMSMPNLPDESVPIGTDESQN
VEVRRWGTPRSFDFPIKDHVDLGEQCKGLDFKSAVKLTGARFVVMQGQVARLHRALAQFM
LDLHTQEHGYTETYVPLLVNDASLLGTGQLPKFAEDLFHTKPATEEGQSLHLIPTAEVPL
TNLVRDSIVEEDELPIKLTAETACFRSEAGSYGKDTRGLIRQHQFDKVELVKLVKPETSM
DELESLTKDAETVLQKLGLPYRVIVLCTGDMGFSSAKTYDIEVWLPAQNTYREISSCSNM
KDFQARRMQARYRSKDDKKPKLLHSLNGSGLAVGRTLVAVLENYQNADGSVTVPEVLRSY
MGGLEKIG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttagatcctaaatatctgcgtaatgaacttgccaccaccgctgagcggctggcgacc
cgtggttttattctcgatgttgaccggctaacccggctggaagaaaaacgtaaggctctg
caagtagaaactgaagagctgcaagccagtcgcaatgccatgtcgaaatcgattggtcag
gcgaaagcgaagggtgaagatgtctccgaaatcatggcgcaggtcaatgatctcggtagc
aagctcgacaccaaaaagcaggagctgtcgcagttattagatgaattgaacgcgattgca
atgagcatgcctaacctgcccgatgaatcagttcctattggtaccgatgaatcgcaaaac
gttgaagtacgccgctggggtactcctcgtagctttgattttccgattaaggatcacgtg
gatctgggcgaacagtgcaaagggctggatttcaagagtgccgtcaaactgaccggggcc
cgttttgtggtgatgcaagggcaggtcgcacgactgcatcgcgcactagcccaatttatg
ttggatctgcacactcaggaacatggttacacagaaacctatgtgccactgttggtcaat
gacgccagtctgttaggtactgggcagttgcctaagtttgctgaagacctgtttcatacc
aaacctgcgactgaagaagggcagagcctgcacctgatcccaaccgctgaagtaccactg
actaacttggtacgtgacagtattgttgaagaagatgagttaccgatcaaactgaccgca
gaaaccgcgtgtttccgcagcgaagcgggctcctatggtaaggatacgcgtgggttgatc
cgtcagcaccagttcgacaaagtagaattggttaagctggtaaaacctgaaacctccatg
gatgaattggaaagcctgactaaagatgcagaaactgtgttgcaaaagctgggcctgcca
tatcgggtcatcgtactatgtactggcgacatggggtttagttctgcaaaaacttatgat
atcgaagtctggttgccggcacagaatacctatcgcgaaatctcttcttgctccaacatg
aaggatttccaggcacggcgtatgcaagcacggtatcgcagtaaagatgataaaaaacct
aagttactacatagccttaatggttctggccttgccgttggtcgtacgttagttgccgtt
ctggaaaattaccagaatgccgatggcagtgtcaccgtaccagaagtgctacggtcatac
atgggtggattggaaaaaatcggttag
DBGET
integrated database retrieval system
