Shewanella dokdonensis: KHX94_18765
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Entry
KHX94_18765 CDS
T07469
Name
(GenBank) replication-associated recombination protein A
KO
K07478
putative ATPase
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
KHX94_18765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
Mg_chelatase
AAA_16
AAA_22
AAA_30
AAA_14
Sigma54_activat
AAA_19
Parvo_NS1
nSTAND3
DUF815
ResIII
AAA_2
Sigma54_activ_2
ABC_tran
AAA_3
AAA_28
AAA_11
TniB
AAA_24
NPHP3_N
MeaB
AAA_18
RNA_helicase
RCF1-5-like_lid
DUF5906
AAA_33
AAA_17
AAA_25
IstB_IS21
TsaE
RsgA_GTPase
Zeta_toxin
AAA_7
MMR_HSR1
NB-ARC
cobW
Motif
Other DBs
NCBI-ProteinID:
QVK23107
LinkDB
All DBs
Position
complement(3897790..3899121)
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AA seq
443 aa
AA seq
DB search
MSSMSFDFAPDFRPLAARMRPTTLVEYIGQKHLLGEGQPLRKALEAGKAHSMMLWGPPGT
GKTTLAELIAQYTNAHVERISAVTSGVKEIRAAIEHAQNVAQSRGQRTLLFVDEVHRFNK
SQQDAFLPFIEDGTVIFIGATTENPSFEINNALLSRVRVYLINKLSDPEIAELVQRALTD
DERGLGKRQLLMPESVLSQLANVADGDGRKALNLLELMSDMLPDGGAFSEELLVQVSGQQ
LARFDKNGDQYYDLISAVHKSIRGSAPDAALYWYCRMLEGGCDPLYVGRRLLAIASEDVG
NADPTAMTVALNAWDCFHRVGPAEGERAIAQAIVYLALAPKSNAVYTAFKAARQLARESG
GEAVPMHLRNAPTKLLEELGAGKEYRYAHDEPNAYAAGENYFPEALKNSRFYHPTERGFE
KRMAEKLKQLQQLDLYSERKRYE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtatgagttttgattttgcgccagatttccgtccgcttgcagccagaatgcgg
ccgacgaccttggtggaatatatcggacaaaagcatttgttaggtgaaggacaaccctta
cgtaaagcgttagaagcgggcaaagctcattcaatgatgttgtgggggccgccaggcact
ggcaaaaccacgctggcagaactgatagcacaatacaccaatgcccatgttgagcggatt
tcggcggtaacgtctggtgtaaaagaaatccgcgcggccattgaacatgctcaaaatgtg
gcgcaatcccgcgggcagcgcaccttgttgtttgtggatgaagtgcatcgtttcaataaa
agccagcaggatgcatttttgccgtttattgaagatggcacggtgatttttatcggggcg
acgacagagaatccatcatttgagatcaacaacgcattgttgtccagagtcagggtttat
ctgatcaataaactgtctgatcctgaaattgccgagctggtgcagcgagcattgacagat
gatgagcgcggtctgggaaaacggcagttgctcatgccggaatcggtattatcgcagtta
gccaatgttgccgatggtgatggacgtaaagcactaaatttattggaactgatgagtgat
atgttgcctgatggcggtgcattctctgaggagctgttagtgcaggtctcgggtcagcag
ttggcccgcttcgataaaaatggcgatcagtattacgacctgatctcggcagtgcataaa
tctatccggggctctgcacccgatgccgcgctttactggtattgccgcatgctggaaggt
ggttgcgatccgttatatgttggacggcggctcttagcgatcgcctctgaagatgtgggc
aatgccgatcccaccgcgatgacagtggctttgaatgcctgggactgttttcaccgtgtc
gggccggcagaaggtgaacgtgccattgctcaggcgattgtttacctggcgttagcgccc
aagagtaatgcggtatacacagcgtttaaagccgctaggcaattggcaagagaaagtggc
ggcgaagccgtgccgatgcatctgcgaaatgcgcccaccaaattactggaagaactgggc
gccgggaaagagtatcgctatgctcatgacgagccaaatgcttatgctgctggggaaaac
tatttccctgaagccctgaaaaacagtcgtttctatcatccaactgagcgtggttttgaa
aaacggatggccgagaaattaaaacaattgcaacaactcgatttatacagcgagcgcaaa
cgttatgaataa
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