Shewanella dokdonensis: KHX94_19040
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Entry
KHX94_19040 CDS
T07469
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
KHX94_19040 (lapB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
Zn_ribbon_LapB
TPR_7
TPR_16
ARM_TT21_N
ARM_TT21_C
NRDD
ZZ
Motif
Other DBs
NCBI-ProteinID:
QVK24945
LinkDB
All DBs
Position
complement(3936993..3938099)
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AA seq
368 aa
AA seq
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MGRRNLRQKQNLKQKQLSRDYFTGLNFLLSNESDKAVDLFISMLDVDDETIDTHLSLGSL
FRKRGEVDRAIRIHQNLIARPSLATEQRDLAMMELGKDYLAAGFYDRAEEIFLNLVGQED
HSEDAEKELIAIYQMTKEWQKAIDITRRLPRKSQQSLKPVIAHFYCQLAEETEDKNLQIK
MLRQALKQDAECGRALLALTKIYLEFKQFDEVRQTLEKLSEADAELFADALPYAKQLLKA
TGDNHYYRQLLVSAIDKGAGASVVVALALQMLDAGDIKGAETLVLDALYRHPTMRGFQLL
MQMHIRQAEKGQARDSLAMLEQLVEQQIRFRPSYRCRECGFPSHTLYWHCPSCKNWGSIK
RIRGLDGE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggggcgccgcaacctgagacaaaagcagaatcttaagcagaagcagcttagccgtgac
tatttcactgggctgaattttttattgtctaacgaatctgacaaagcggttgatctgttt
atcagcatgttggatgtggacgatgaaaccatcgacacccatttatccttgggatcctta
tttcgcaaacgcggtgaagtcgaccgggctatccgtattcatcaaaatcttatcgctcgg
ccatcgctcgctacagaacagcgagatttagccatgatggaactgggcaaggattatctt
gccgcgggtttttatgatcgtgctgaggagatttttcttaatcttgttggacaggaagat
cactctgaagacgcagagaaagagcttattgctatttatcagatgaccaaagaatggcaa
aaagccattgatattacccggcgattaccgcgcaaaagtcagcagtcgttaaaacccgtc
attgcccatttctattgtcagttagccgaagaaaccgaagataaaaacttacagattaaa
atgctgcggcaggcactaaaacaggatgctgaatgcggcagggcattactggcactgacc
aaaatatatcttgaatttaaacagtttgacgaggtgcggcagacattggaaaaactcagt
gaagcggatgctgaactctttgccgatgcgttgccttacgccaaacaactgctgaaagca
acgggtgataatcactattatcggcagttattagtcagcgccatcgataaaggcgccggg
gcgtcagtggtcgtggcgctggcattgcaaatgttggatgccggcgatattaaaggggct
gaaacattggtgcttgatgcattataccgtcacccgacgatgcgtggcttccaactgttg
atgcagatgcacatccgtcaggcggagaaaggccaagcgcgcgatagtctggcaatgctg
gaacagttggttgagcagcagatacgttttcgtcccagttatcgttgccgtgaatgcggc
ttcccgtcacataccctttactggcattgtccttcttgcaaaaattggggcagcattaag
cgtattcgtggtcttgatggtgaataa
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