Shewanella dokdonensis: KHX94_19380
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Entry
KHX94_19380 CDS
T07469
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdk01002
]
KHX94_19380
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdk01011
]
KHX94_19380
Peptidases and inhibitors [BR:
sdk01002
]
Cysteine peptidases
Family C82
KHX94_19380
Peptidoglycan biosynthesis and degradation proteins [BR:
sdk01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KHX94_19380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QVK23198
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All DBs
Position
complement(4016464..4017360)
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AA seq
298 aa
AA seq
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MPHYPDNGYDYSDTLATAVRHFQLRHGLKEDAVIGPNTLYWLNMSPRTRATLLAQMFVAE
TRYRAQLPDSYILVNVPAYHLQLVDEGSTVLQSKVMVGLPYRQTPLLESRISSVVLNPGW
HVPRSILRKDLLPHIRKDGNYLNQRNFRVFDYQGNLVEQTPEQWQQLAYGRFPYRVVQQP
GAHSALGRFKFHFENSFDVYLHDTPEKQLFNRADRALSSGCVRVEKANELAQWLAQHRLR
DPRKWHDMQQDFHTTQWFALTQPLPVYIVYWTAWVDQQGTAQFRDDIYHKFSSVAELR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcactatcccgataatggctatgactattccgacacgctagctactgccgtacgt
cacttccaactgcgccacggactgaaagaagatgcggttattggccctaacacgctgtac
tggttgaatatgtcgcctagaacgcgcgccacactgctggcgcagatgtttgtggccgaa
acgcgttatcgggcgcaattacctgacagctacattttggtcaatgtgccagcgtatcac
ctgcaactggtggatgagggctccacagtgttgcaatcaaaagtcatggtcggcttgcct
taccgacagacacctctgcttgaaagtcgtatttccagtgtggtgctaaatcctggttgg
catgtcccacgcagtattttgcgcaaggatctgttgccgcacattcgtaaggacggtaac
tatcttaaccagcgaaattttcgggtttttgactatcagggcaatctggttgagcaaaca
ccggaacaatggcaacaactggcctatggtcgattcccttaccgcgtagtgcaacagccc
ggcgctcatagcgcgctaggccgatttaaatttcattttgagaatagctttgatgtgtat
ttgcatgatacgccggaaaaacagctgtttaaccgtgctgaccgggcattatcatccggt
tgtgtcagagtcgaaaaggccaatgagttagcgcagtggttggcacagcatcggctgcgg
gacccgcgtaagtggcatgatatgcagcaggacttccataccactcagtggtttgctttg
actcagccgttacccgtttatattgtttactggaccgcttgggttgatcagcagggcaca
gcacagtttcgtgatgacatttaccacaaattttcttcagtggcagaattaaggtaa
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