Sulfurospirillum deleyianum: Sdel_0632
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Entry
Sdel_0632 CDS
T01126
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sdl
Sulfurospirillum deleyianum
Pathway
sdl03030
DNA replication
sdl03430
Mismatch repair
sdl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sdel_0632
03430 Mismatch repair
Sdel_0632
03440 Homologous recombination
Sdel_0632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdl03032
]
Sdel_0632
03400 DNA repair and recombination proteins [BR:
sdl03400
]
Sdel_0632
Enzymes [BR:
sdl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sdel_0632
DNA replication proteins [BR:
sdl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sdel_0632
DNA repair and recombination proteins [BR:
sdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sdel_0632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
ACZ11668
UniProt:
D1B051
LinkDB
All DBs
Position
624249..627797
Genome browser
AA seq
1182 aa
AA seq
DB search
MSELHYTHLHLHTEYSLLDGANKIGKLAKKLKAQGVGSVAITDHGNMFGALDFYKTMRKE
GIKPIIGIEAYIHNQDDIGDKTTKQRFHLCLFAKNEIGYKNLMYLSSMSYIKGFYYYPRI
NKQLLKEHSEGLICSSACLQGEVNWHLNLNNKRNVQFGAKGYERAKEVALEYKAIFGDDF
YLEIMRHGINDQMFIDDNILRIAKETGIKVIATNDTHYLEPDDAEAHEAFMCIAMNKEFD
DPNRLRHSVHEFFVKSPEQIADLFVDIPEVLENTQEIVDKCNLEIKLGDPTPPKFKFTKE
YAAREGLSFESDDDFFAHKCREGLKERLKYVDASKHEEYKARLEREISVICTMKFPGYML
IVWDFIREAKSRGVPVGPGRGSAAGSLVAYSLFITDLDPMPYNLLFERFLNPERISMPDI
DVDFCQSRRGEIIDYVVEKYGRYNVAQVITFGKLLAKGVIRDVARVLAIPYAEADAMAKL
IPDELGITLNGIGVEGEEGFKAGAYQKEPKLRELIERDPRMQRVWKFALALEGLNRNSGM
HAAGVVISDEELWHKTPLYQPSGEDHLVTQYSLNFLEDVDLIKFDFLGLKTLTVIDNALK
LIKARYNKTIDFNALDLNDPKVYELIQSGDTIGLFQIESSGMQSLNERLKPNTFEDLIAV
LALYRPGPMESGMLDDFIDRKHGRKEVTYFFDEFTKPLQPILEPTYGVIVYQEQVMQIVQ
SIGGFSLGESDLIRRAMGKKKIDYMKQKAEEFADGAVKQGLDRAHAIELFGLIEKFAGYG
FNKSHSAAYALITFQTAYLKCYYPQEFMAALLTSEQDNTDKIVKYIDEVKRLGIKLLPPS
IQHSLIEFSAITDSDGCEAILFGMGAIKGVGNAAISKILEARADAPFSDMSDFISRIDGS
KVNKKVLESLIKSGSFDGFGYSRRALLESIDTIIEASGECSRAKKMAEYSLFGDSEEMTS
VAVKIEPISEFDSKRMLELEKETIGFYISGHPLDAFRAQIDEMNYMLSSEKDQIEDGSKA
LFIGKVESITEKMSKKGNKFGVVSLMDFHGSMELTVFEKQLEALSKMDLERPLCFKVDVT
NDGQSLKMRVMKIMEIEEAKKEKIETKVIEAPLEPKVLKLRLSEDVTTLEMVYQLARQHA
GRRALKLLITSKLQDVLIETSLSVDDSLDEKLAALEWVEVVE
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattacactatacccatttacatttacataccgaatactccttgcttgatggt
gccaataaaataggcaaactagcgaaaaaactgaaagcccaaggggttggctctgttgcg
attaccgaccatggcaatatgtttggcgctcttgatttttacaaaaccatgcgaaaagag
gggataaaacctattattggcattgaggcgtacattcataaccaagacgatattggcgat
aaaacgaccaaacaacgctttcacctctgcttatttgctaaaaatgagattggctataaa
aatttaatgtacctctcttcgatgagctacattaaaggattttattactatccacgtatt
aacaaacagctcttaaaagagcattcagaaggtttgatttgctcgagtgcgtgtttgcaa
ggtgaagtgaattggcatctcaatctcaataacaaacgtaatgttcaatttggtgccaaa
gggtatgaaagggctaaagaggttgctttggagtacaaggcgatttttggggatgatttt
tatttggaaattatgcgccatggcattaatgatcagatgtttattgatgataatattttg
cgcattgccaaagagacaggcattaaagtgattgcgaccaatgacacgcactacttagag
cctgatgatgcagaagcgcacgaggcgtttatgtgtattgcgatgaacaaagagtttgat
gacccaaatcgtcttcgtcactctgtccatgagttttttgtcaaatcccccgagcagata
gccgatctttttgtggatattcctgaagtgcttgaaaatacacaagagattgtggataaa
tgtaatttggagattaaactaggtgatccaacccctccaaaatttaaatttaccaaagag
tatgccgctcgtgagggactctcttttgagagtgatgatgacttttttgcgcacaaatgc
cgtgagggtttaaaagagcgtttaaaatacgtcgatgcaagtaagcatgaagagtacaag
gcaaggcttgagcgggagattagcgttatttgcactatgaaattccctggttatatgctt
attgtttgggattttattcgtgaagccaaaagcagaggtgttcccgtaggtcctggtagg
ggttctgcggcggggagtttggtcgcatattcgctttttattaccgatcttgatccgatg
ccttataacttgctttttgaaaggtttttaaatcctgaacgtattagtatgcccgatatt
gacgtggatttttgtcagagcaggcggggtgagattattgattatgtcgtagaaaagtat
gggcgttataacgtggcacaagtgattacctttggtaagcttttagccaaaggagttatt
cgtgatgtcgcccgtgttttagcgattccttacgctgaagccgatgccatggcaaagctc
attcctgatgagctgggcattaccttaaatggaataggagttgagggcgaagaggggttt
aaagcaggagcctatcaaaaagagcccaagcttagagaactcattgagcgtgaccctagg
atgcagcgagtctggaaatttgccttagctcttgaaggactgaaccgaaactcaggtatg
catgccgcaggtgtggtaattagcgatgaagagttgtggcataaaacaccactctatcaa
ccctcaggtgaagatcatttggtcacccagtattcgctcaactttttggaagatgtggat
ttgattaagttcgactttttgggacttaaaacactgacggtgattgataatgcgctcaaa
ctcattaaagcacgctataacaaaaccattgattttaacgcactggatttgaatgatcct
aaagtgtatgaactgattcaaagtggtgataccatcgggcttttccagatagaatccagc
ggtatgcaatcgttaaatgagcgtttaaagcccaacacctttgaagatttaattgcggtc
ttagcactgtatcgtccagggcctatggaatcaggtatgttggatgattttattgacaga
aagcacgggcgtaaagaggttacttacttttttgatgagtttaccaaacctttacagcct
attttagaaccaacctatggggtgattgtctatcaagaacaggttatgcaaattgttcaa
agcattggtggatttagtttgggtgaatcagacttgattcgtcgtgcgatgggtaagaaa
aagattgattatatgaaacaaaaagccgaagagtttgccgatggtgcggtgaagcaaggc
ttagatagagcccatgcgattgagctttttggcttgattgaaaagtttgcagggtatggt
tttaataaatcgcactctgccgcttacgcactgattacctttcaaacggcgtacttgaaa
tgctactatcctcaagagtttatggcagcgcttttgacctcagagcaagacaataccgat
aaaatcgttaaatacattgatgaggtgaagcgtttaggcattaaacttcttcctccttca
atccaacattcactcattgaatttagcgctattacggatagtgatgggtgtgaagcgatt
ttgtttgggatgggggcgattaaaggggttggcaatgcggcgattagtaaaattttagaa
gccagagccgatgctcctttctctgatatgagcgattttatctctcgtattgatggctca
aaagtcaataaaaaagttttagaatcgctgattaaatcaggaagttttgatggttttgga
tacagcagacgagctttgttagagagcattgataccattattgaagccagtggagagtgt
tctagggctaaaaagatggcagagtattcgctttttggtgacagcgaagagatgaccagt
gtggcggtcaaaattgagccgattagtgaatttgatagcaaacgtatgttggaacttgaa
aaagagaccattgggttttatatttcaggacatcctttggatgcatttagggctcagatt
gatgagatgaattatatgctctccagcgagaaagaccaaattgaggatggttcaaaagcg
ctttttattggaaaagtggagagcattacagagaagatgagtaaaaaagggaacaagttt
ggtgtggtttctctgatggattttcatggttctatggagctgactgtctttgaaaaacag
cttgaagcgctctccaaaatggatttagagcgacccctttgttttaaagtggatgttacc
aatgatggacagagccttaagatgcgtgtgatgaaaatcatggagatagaagaggctaaa
aaagagaaaattgaaaccaaagtcatcgaagcgcctttggagccaaaggttttaaaatta
cgattgagtgaagatgtgacgaccttagaaatggtttatcaattagcaaggcaacatgct
ggaagaagggcgctaaaacttttgattacctcaaaattacaagatgttttgattgaaaca
tcgttgagtgtggatgatagtctggatgagaaattagccgcattagagtgggtagaagtg
gttgagtaa
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