Sulfurospirillum deleyianum: Sdel_1375
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Entry
Sdel_1375 CDS
T01126
Name
(GenBank) putative DNA polymerase III delta prime subunit HolB
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sdl
Sulfurospirillum deleyianum
Pathway
sdl03030
DNA replication
sdl03430
Mismatch repair
sdl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sdel_1375
03430 Mismatch repair
Sdel_1375
03440 Homologous recombination
Sdel_1375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdl03032
]
Sdel_1375
03400 DNA repair and recombination proteins [BR:
sdl03400
]
Sdel_1375
Enzymes [BR:
sdl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sdel_1375
DNA replication proteins [BR:
sdl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sdel_1375
DNA repair and recombination proteins [BR:
sdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sdel_1375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
C2185-like_N
Motif
Other DBs
NCBI-ProteinID:
ACZ12395
UniProt:
D1B2S5
LinkDB
All DBs
Position
complement(1388547..1389173)
Genome browser
AA seq
208 aa
AA seq
DB search
MKTSEEEVFSHILISKNVEKAKAHLEEVYTKARHLFFLKDEFLLEDAKEVIKEAYIAEAT
HKYLILVAKSYRIEAQNALLKILEEPPRHIIFIVVAPSKTALLPTIRSRLVQKELVAECE
VMHSGLDLKRLDLGDIYPFVQKHQGCEKGVLKELVQAIIYEALHEHHLRFSENELEGFQK
LVHLVELNSKAQTILSTLLLTIMLRKHR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacgagtgaagaagaggtttttagccatattttaatttcgaaaaatgtggaaaaa
gccaaagcgcatcttgaagaggtgtacaccaaagcacgtcaccttttttttctcaaagat
gaatttttacttgaagatgccaaagaggttattaaagaggcgtatatcgccgaagctacg
cataaatacttgattttagtggcaaaaagttaccgcattgaagcgcaaaatgcccttttg
aaaattttggaagaacctccacgtcatattatttttattgtggttgcgccttctaaaaca
gcactgcttcctacgatacgctctcgtttggttcaaaaagagttagtggctgagtgtgag
gtgatgcattcaggacttgacttgaaacgactcgatttaggcgatatttatccttttgtt
caaaagcatcaaggttgtgaaaaaggggtacttaaagagcttgttcaggcgattatttat
gaagctctgcatgaacatcacctgcgttttagtgaaaatgaattagaaggttttcaaaaa
ttggtgcatttggttgagctaaactccaaagctcaaacgattttaagtacacttttattg
acgattatgcttaggaaacatcgatga
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