Sulfurospirillum deleyianum: Sdel_1546
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Entry
Sdel_1546 CDS
T01126
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sdl
Sulfurospirillum deleyianum
Pathway
sdl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sdel_1546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdl03021
]
Sdel_1546
Transcription machinery [BR:
sdl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sdel_1546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
DUF2397
Motif
Other DBs
NCBI-ProteinID:
ACZ12562
UniProt:
D1B392
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All DBs
Position
1559824..1561677
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AA seq
617 aa
AA seq
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MASKELYTELEELFVENEKSYVTYENVMELFVKPPTPANVKKLMGLLEKYKVTLISSAEI
AKLRNKEEAKKREEERQKLQDEALEDEFDLASEKELLEWSRSDSPVRMYLREMGQISLLT
KEEEIDISKKIEFGEDIIIDAFCSVPYLIDFILDYKEALINRERRVKELFKTFEDDDDGD
DDDSDDGEEFDEEGEEKRPLSKKDNSRTEKVIESFKALEKAKKDWMKSFARPPEENLDAE
EMMNYDLALAYKKKLLKDALMDLGPTSKLINELVKSMETALKSDFEFDKELKRLEYRLPL
FNETLKENHQNLLKNIIDLNKEDIATMVPEATMVSTYMEIKKLFQTKEASKQGFDLDPEK
LKEILEQIKRGKKIADESKTRMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMKAVD
KFEYKKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRINKIIRKHLQEEGKE
PDIETIALEVGLSADKVKNVIKITKEPISLEAPIGNEDDGKFGDFVEDKTSIAPLEHILK
SDLKEQIDDVLDQLNDREKAVIRMRFGLMHDESDRTLEEIGKELNVTRERVRQIESSAIK
KLKHPKVGRKLKNYIES
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaaagaactgtatacagaattagaagagctttttgtcgaaaatgaaaaatct
tatgtcacgtatgaaaacgtgatggaactctttgtaaaacccccaacacccgcaaacgtt
aaaaagttgatgggattgctcgaaaaatacaaagtcacccttatttcttctgctgaaatt
gcgaaacttcgcaacaaagaagaggcaaaaaaacgtgaagaagagcgccaaaaactccaa
gacgaagccttagaagacgagtttgaccttgccagtgaaaaagagcttttagagtggtca
agaagcgacagtcctgtgcgtatgtatctaagagagatgggacaaatttcgcttttaacc
aaagaagaagagattgacattagtaaaaagatagagtttggcgaagatattattattgat
gcgttttgttcagtgccttatcttatcgactttattttagattataaagaagccttgatt
aatcgtgaacgccgtgttaaagagttgtttaaaacctttgaagatgacgatgatggcgat
gacgatgatagcgatgatggggaggagtttgatgaagaaggggaagagaaacgccccctt
tctaaaaaagataactctcgaaccgaaaaagtcatcgaaagctttaaagccttagaaaaa
gcaaaaaaagattggatgaagagttttgctcgtccacctgaagagaatcttgatgctgaa
gagatgatgaattacgatttggcattggcgtataaaaagaaattgcttaaagacgcattg
atggatttagggccaaccagtaaactcattaatgaactcgtcaaatctatggaaacagct
cttaagagtgattttgagtttgataaagaactcaaacgcctagagtatcgtttacctctt
tttaacgaaacactcaaagaaaatcatcaaaatcttcttaaaaacatcattgatttaaac
aaagaagatatcgctacaatggttccagaagctacaatggtttcaacgtatatggaaatt
aaaaagctttttcaaaccaaagaagccagtaagcaaggctttgatttggaccctgaaaag
ctcaaagagattttggagcaaatcaaacggggtaaaaaaattgccgatgagtctaaaaca
cgtatggcaaaaagtaaccttcgtctggttgtttctattgctaaacgttacaccaaccga
ggcttgccatttttggatttgattcaagaaggaaacattggtttgatgaaagcggttgat
aaatttgagtacaaaaaagggtacaaattttcaacctacgccacatggtggattcgtcaa
gccatctcacgtgcgattgccgatcaagcccgtaccattcgtatcccaattcatatgatt
gagaccattaaccgtatcaataaaatcattcgtaaacaccttcaagaagaaggtaaagag
ccagacatcgagaccattgcattggaagtgggcttgagtgcggataaagttaaaaacgtt
attaaaatcaccaaagagcctatttcgttggaagcgcctattggtaacgaagacgatgga
aaatttggtgattttgtcgaagataaaacatccattgcccctcttgagcatattttaaaa
tcagaccttaaagagcaaattgacgatgtacttgatcagctcaacgacagagaaaaagcg
gtcatccgtatgcgttttggtttaatgcacgatgagagcgatagaaccttagaagagata
ggtaaagagcttaatgtcactcgtgaacgtgtgcgccagattgaaagttctgccattaaa
aagcttaaacatccaaaagtaggaagaaaacttaaaaattatattgaaagctaa
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