Sulfurospirillum deleyianum: Sdel_1602
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Entry
Sdel_1602 CDS
T01126
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
sdl
Sulfurospirillum deleyianum
Pathway
sdl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sdel_1602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdl03400
]
Sdel_1602
DNA repair and recombination proteins [BR:
sdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sdel_1602
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sdel_1602
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
T2SSE
DUF87
Kinesin
Microtub_bd
DUF1128
UB2H
AAA_14
AAA_22
nSTAND_NTPase5
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ACZ12618
UniProt:
D1B3E8
LinkDB
All DBs
Position
1618015..1619991
Genome browser
AA seq
658 aa
AA seq
DB search
MSEFFLESPYQPSGDQPRAIERLSASIKKGNRYQTLIGVTGSGKTYTMAQIIQKLKMPTL
IMTHNKTLAAQLYSEFKGFFPKNHVEYFISYYDYYQPEAYIPRSDLFIEKDSSINEELER
LRLSATASLLSYDDVICVASVSANYGLGNPHEYKKMVQIIEKGESINQKKLLLRLVDMGY
KRNDTFFDRGCFRVSGDVVDIFPAYNEEEAIRVEFFGDEVESIYYFDVFLNKKLQSLPKV
VLYAANQFIVGHERLQKAIKSIEQELDERLAYFQKEDKLVEYQRLKQRVEFDLEMLQSTG
ACKGVENYARYLTGIEPGATPYSLFDYFEAMGKEYLVIVDESHVSLPQFRGMFAGDRSRK
EVLVEYGFRLPSALDNRPLMFDEFINKAPRYLFVSATPKELELGLSGENVAEQIIRPTGL
LDPEVEILSSKNQVETLYDRIKEVTCKDEKVLVTVLTKKMAEELTRYYADLGMKIKYMHS
DIDAIERNQIIRSLRVGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQT
MGRAARNLNGRVLMFAEKITDSMQKAIETTLRRRALQEAFNQEHGITPTSTTRKMDENLK
LEEHSDIYNTYDKKDKIPPSEKKKIIAELTKAMHEAAKILEFEKAAKLRDQIEKLKKA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatttttcctagaaagtccttatcagccctcaggcgaccagcctcgtgccatt
gaaagactcagtgcttccatcaaaaaaggcaatcgctaccaaaccctcatcggagtgacg
ggcagtggtaaaacctacacgatggcacagattatccaaaaactaaaaatgcccacgtta
attatgacacacaacaaaaccctcgccgctcagctttacagcgaatttaagggctttttt
cctaaaaatcacgtggagtattttatcagctactacgattactatcagcctgaggcgtat
attcctagaagtgatttgtttattgaaaaagacagctctattaacgaagagttagagcgt
ttaagactcagtgctaccgcttcactgctctcttacgatgatgtgatttgtgtggcatcg
gtttcggcaaactatggtttgggaaatcctcacgaatacaaaaaaatggtgcaaattatc
gaaaagggtgagagcattaatcaaaaaaagcttcttttacgtttagtagatatgggctac
aaacgcaatgacactttttttgatcggggatgttttcgtgtcagtggtgatgtggtcgat
attttccctgcgtacaacgaagaagaagccattcgggtggaattttttggcgatgaagtc
gagagcatttactactttgatgtctttttaaataaaaaactccaaagcttacctaaagtg
gttctttatgcagccaatcagtttattgtagggcatgagagacttcaaaaagccataaaa
tccattgagcaagagctcgatgaacgcttagcctattttcaaaaagaggataaactcgtt
gagtaccagcgactcaaacaacgggttgagtttgatttggaaatgcttcaaagtacagga
gcgtgtaaaggggtggaaaattatgctcgttatctcacaggcattgagccaggggctacg
ccttactcgctttttgactactttgaagccatgggcaaggagtatctggtcatcgtcgat
gaatcacacgtcagtcttcctcaatttcgaggcatgtttgcaggtgatagaagtcgaaaa
gaagtactcgtggagtatggctttagacttccgagtgcgctagataaccgtcctttaatg
tttgatgaatttattaacaaagcgcctcgttatctttttgtgagtgccacacctaaagag
ttagaattaggactcagtggagaaaatgtggcagagcagattattcgccctactggactg
cttgatcctgaagtggaaatactaagcagtaaaaatcaagtcgaaacactttatgaccgc
ataaaagaagttacatgtaaagatgaaaaagtgcttgtcaccgtgctcactaaaaaaatg
gcagaagagctcacccgctactacgccgacttgggtatgaaaatcaaatacatgcactcc
gacattgatgccattgagcgcaatcaaatcatacgctctttacgtgtgggcgagtttgat
gtattggtgggcattaacctgcttcgtgaggggctggatttgcctgaggtttctttggtt
gcgattttagatgcggataaagagggatttttacgctcggagacgagtttgattcaaacg
atgggacgtgccgcacgaaatcttaatggcagagtcttaatgtttgcggagaaaatcacc
gactccatgcaaaaggcgattgagacgacacttagaagaagagctttacaagaggcattt
aatcaagaacatggcattaccccaacgagcacgacacgtaaaatggatgaaaatcttaag
cttgaagagcatagtgatatttacaacacctatgataaaaaagataaaattccacccagc
gagaagaaaaaaattatcgccgaactcaccaaagcgatgcatgaagccgcaaagattttg
gaatttgaaaaagcagccaaactgcgggatcaaatcgaaaagctcaaaaaggcgtaa
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