Sulfurospirillum deleyianum: Sdel_1851
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Entry
Sdel_1851 CDS
T01126
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sdl
Sulfurospirillum deleyianum
Pathway
sdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sdel_1851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdl03019
]
Sdel_1851
Enzymes [BR:
sdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sdel_1851
Messenger RNA biogenesis [BR:
sdl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sdel_1851
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
CMS1
HI1480
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ACZ12866
UniProt:
D1B446
LinkDB
All DBs
Position
1883012..1884265
Genome browser
AA seq
417 aa
AA seq
DB search
MLFSDLNLNASILKAVQEEGYTHPTPVQEKAIPFILEGRDMLAGAQTGTGKTAGFTLPLL
ELLLKKPRNKAKPSLRVLILTPTRELAAQVGESVRTYGKYLPFKSAVIFGGVGIHPQIQT
LKNGIDILVATPGRLLDHVSQGTINLKEIDTFVLDEADRMLDMGFIKDIRKVIALLPSKR
QNLLFSATYSDEIKTLCASILKNPAVVEVARRNTSSELVNQRVIIVDCKRKTALLGKLIS
EHKWKQVLVFTRTKHHANKVSEYLSKIGISASAIHGNKSQSARTKALADFKSGSIKVLVA
TDIAARGLDIDQLPHVINLELPNIAEDYVHRIGRTGRAGNEGEAISLVCVDEFDYLKGIE
KLIKKTLEREVVEGFEPDPTIKAEPIQQGRGAKPQGQPKRREHAPREYVEKRREKKR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttattttcagatttaaaccttaatgcctctattttaaaagccgttcaagaagaaggc
tatacccatcctacgcctgtacaagaaaaagccattccttttattttagaaggacgtgac
atgctagcgggcgcacaaacgggtacaggcaaaaccgctggttttacacttcctctttta
gaactcctcttaaaaaaaccacgcaacaaagccaaaccttctcttcgtgtgcttatctta
acccctacacgagaactcgccgcacaagtgggagagagtgtgagaacctatggcaaatat
ttaccctttaaaagtgcggttatttttggaggggtgggcatacatcctcaaattcaaacg
ctgaaaaatggcattgatattttagtggcaacccctgggcgtttgctcgaccacgtctca
caaggaacgattaatctcaaagagattgatacctttgtactcgatgaagccgatagaatg
ctggatatgggatttatcaaagacattcgcaaagtcattgccctgcttccttccaaacgt
caaaatcttctcttctccgccacctattccgatgagataaaaacactctgtgcttctatc
ttaaaaaatcctgcggtggtagaagtcgctcgccgtaacacctcaagtgaactggtcaat
cagcgtgtgattatcgttgattgtaaacgtaaaacggctcttttgggcaaactcatttcg
gagcacaaatggaagcaagttctcgtctttacccgcaccaaacaccatgccaataaagtc
tctgaatatctcagtaaaataggcattagcgcatcagcgattcatgggaacaaaagccaa
agcgctcgtacgaaagccttggctgattttaaaagtggtagcattaaagtgttggttgcc
acggacattgccgcacggggactggacattgaccaactgccgcatgtcattaacctagag
ttgcctaacattgccgaagattacgtgcaccgcattggacgaacaggacgggctggaaat
gagggtgaagcgatttccttagtctgcgtggatgaatttgactacttaaagggcattgaa
aaactaattaaaaaaacactagagcgtgaagtcgtggaaggctttgagccagacccaacg
attaaagcagaacccatccaacaaggaagaggcgctaaacctcaggggcaaccaaaacga
agagagcatgcacctcgtgaatacgttgaaaaaagaagagaaaaaaagcgatga
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