Stegodyphus dumicola: 118179701
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Entry
118179701 CDS
T07385
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03022
Basal transcription factors
sdm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118179701
09124 Replication and repair
03420 Nucleotide excision repair
118179701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdm03021
]
118179701
03036 Chromosome and associated proteins [BR:
sdm03036
]
118179701
03400 DNA repair and recombination proteins [BR:
sdm03400
]
118179701
Enzymes [BR:
sdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
118179701
Transcription machinery [BR:
sdm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118179701
Chromosome and associated proteins [BR:
sdm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118179701
DNA repair and recombination proteins [BR:
sdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118179701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
ResIII
DEAD
PspAA
SNF2-rel_dom
nSTAND3
AAA_11
Motif
Other DBs
NCBI-GeneID:
118179701
NCBI-ProteinID:
XP_035204755
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MKVNIDGLLVYFPYDFIYPEQYSYMLELKRSLDAKGHGLLEMPSGTGKTLSLLSLIVAYH
KAYPSEVSKLVYCSRTIPEIEKVLEELRRLLTYVENETGQVNRIVGLCLSSRKNLCCHPE
VSKEKDGRIVDGKCFALTASHKRSMAAVDPNVDICAYFEAFDRNGREFPLPAGVYDLDDL
KEYGKKHGWCPYFLARHAITQATIVVYSYHYLLDPKIADLVSKEISKQSVVVFDEAHNID
SVCIDSMSVDITRRTIERSQNGIQILEKTVNRIKETDAKKLKEEYQRMVEGLRDAGIARE
TDIVLSNPVLPDEILNEAVPGNIRSAEHFIAFLKRFLEYVKMRLRIQHVVQESPAAFLKD
ILQKVLIERKPLRFCAERLRSLVRTLEITELNDMSSLTALCNFATLVSTYMKGFTIIIEP
FDDRTPSVPNPILHFSCMDASVAIRPVFQRFQSVIITSG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaatatagatggccttctagtgtacttcccatatgatttcatatatcctgaa
cagtattcgtacatgcttgaattgaaacgcagtttagatgctaagggtcatggactactg
gaaatgccttcaggtacaggcaaaactctctccttattgtctctgattgtagcttatcat
aaggcatatccatctgaagtgagtaagttggtatactgctctcgaaccattcctgaaatt
gagaaggtacttgaagagcttcgccgcttgcttacatacgttgaaaatgaaactggccaa
gtgaatagaattgttggactgtgtcttagctcaaggaagaatttatgttgccacccagag
gtgagcaaagaaaaagatggtagaatcgttgatggaaaatgttttgctcttactgcttct
cataaacgtagcatggccgctgtagatccaaatgttgatatttgtgcctatttcgaagcc
tttgataggaatggacgtgagtttcctttaccagctggagtttatgacttagatgattta
aaagaatatggaaaaaaacatggttggtgtccatattttcttgctcgtcatgctataacg
caagccactattgttgtgtacagttatcactatttattagatcccaaaattgctgatctt
gtatccaaagaaatttccaaacaatcagtagttgtctttgatgaagcccataatattgat
agtgtttgtattgactctatgagtgttgatatcacacgaaggactattgaaagaagtcag
aatggaattcaaatacttgaaaaaactgtcaataggataaaagaaacagatgccaaaaag
ctgaaagaagaatatcaacgaatggttgaaggattaagagatgctggcatagctagagaa
actgatattgtgctgtcaaatcctgttcttccagatgaaatattgaatgaagctgttcct
ggtaatataagaagtgcagagcatttcatagcatttttaaaaagatttctggaatatgtt
aaaatgaggcttaggattcaacatgttgttcaagaaagcccagcagcattcctgaaagat
attctacaaaaagttctaattgaaaggaagcctctgaggttttgtgctgaaagattgcga
tctttagtccgaacacttgaaattactgaacttaatgacatgtcatcattaacagctttg
tgtaattttgctacacttgtgagtacatacatgaaaggttttactataataattgaaccg
tttgatgacagaacaccttctgtgccaaatccaattctgcatttcagttgtatggatgct
tcagtggctatcagaccagtttttcaaaggtttcagtcagtgattattacttcaggt
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