Stegodyphus dumicola: 118179747
Help
Entry
118179747 CDS
T07385
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box helicase Dbp80-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03013
Nucleocytoplasmic transport
sdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118179747
03015 mRNA surveillance pathway
118179747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdm03019
]
118179747
Enzymes [BR:
sdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118179747
Messenger RNA biogenesis [BR:
sdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118179747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
118179747
NCBI-ProteinID:
XP_035204803
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MNCKSSDDWGILAELQYRRSSALANFSFKTASLEKLASGLRIYGENETKESPAQNGSLQF
KKLPEAPEYAEKEEDEVELSEAEKSLMRKILRTKLCESSQEVEVLRKDKKSPLYSVKSFE
QLQIPNELLKGVYAMGYNAPSRIQETTLPTLLANPPVNMIAQAQTGTGKTAAFIIASLSR
VNVDEHFPQVLILAPTFELAKQIGDVAQKMAQFCKGIEFRYAVKGEMLAKNETVTEHILI
GTPGKVFDWGRRYHAFDLQKIRVFVLDEADVMISTQGHQDQCIRIHRLLSADCQMLLFSA
TYTTEVIEFAELIIRDPIIIRLRREEETLDNVKQYYIVCKSMNEKYSALRNIYGTISIGQ
AIIFCRTKSTAAWLGGKMTEDGHSVGYLSGDLDVTQRLAVITRFRDGKEKVLITTNVCAR
GIDVEQVTVVINYDLPVLVDRETDFETYVHRIGRTGRFGKPGIAINMVSNERDSEIIKEI
QNHFEKPIKEVKADDANDLEEMGC
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtaagagttctgatgattggggaatcttagctgagctgcagtacagacgctca
tctgctctcgcaaattttagctttaaaactgcctctctggaaaagcttgcttcaggtctg
cgtatttatggagagaatgaaactaaagagtcgcctgcacaaaatggtagcttacaattt
aaaaagctacctgaagcacctgaatatgccgaaaaggaggaagatgaagtggagctgtct
gaagctgagaaatcattaatgcgtaaaattttaaggacaaagctttgtgaaagttcccaa
gaagttgaagtattaaggaaagataaaaaatccccactttattctgtgaagtccttcgaa
cagttgcaaatacctaacgagctgttgaaaggtgtgtacgctatggggtacaatgcacca
tctaggattcaagaaacgacgttacccactcttttagcgaatcctcccgtaaatatgata
gcacaagctcaaactggaacgggcaagacagctgcctttattatagctagcttaagccga
gttaacgttgatgaacatttcccacaggtactcattttggctcccacttttgaattagcc
aagcagattggcgatgttgcccagaaaatggcccagttttgcaaaggtattgaattccgg
tatgctgtcaagggagagatgctggccaagaatgaaactgttacagaacacattcttatt
ggaactcctggcaaagtttttgattggggaagacgctatcacgcattcgatctgcaaaaa
attcgtgttttcgtgttagacgaggcagatgttatgatttccacgcaaggccaccaagac
cagtgcattcgcatacacaggctgttatctgcagattgccagatgctgctattttctgcc
acttacacaactgaagtaatcgaatttgcagaattgattattcgtgatccgattattatt
cgattaagaagagaagaagaaactctagacaacgtgaaacagtattacatcgtatgcaaa
tctatgaatgaaaaatattctgctttacgtaatatatatggcacgatttcaataggacag
gcgataattttttgccgaactaagtcgactgctgcttggttaggcggcaaaatgacagaa
gatggccatagtgtgggttacctctccggtgacctagatgttactcaaagactagctgtc
attacccgattcagagatggaaaagagaaggttcttatcacgaccaatgtgtgcgcacgt
ggcattgatgtggagcaggtgacagttgtaattaattacgatctgccagtcctagtggat
cgggaaactgattttgaaacatacgtgcatcgtattgggcgcactggccgctttgggaaa
ccgggaattgctatcaacatggtttctaatgaaagggattccgaaataattaaagaaatc
caaaaccattttgagaaacccatcaaagaagttaaagcagatgatgccaacgatttggaa
gaaatgggctgttaa
DBGET
integrated database retrieval system
