KEGG   Stegodyphus dumicola: 118182037
Entry
118182037         CDS       T07385                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
sdm  Stegodyphus dumicola
Pathway
sdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118182037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sdm03041]
    118182037
Spliceosome [BR:sdm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    118182037
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd PRP4 NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_EML ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_Vps41 WD_LRWD1 eIF2A Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_SPT8 RMC1_N
Other DBs
NCBI-GeneID: 118182037
NCBI-ProteinID: XP_035207198
LinkDB
Position
Unknown
AA seq 521 aa
MSDDEEIAYVKRQKIIHFGSLEEQERLKLAEKEKEKDEESDDNKEPSDDEEATAAKETLS
AGDVNISEEYMELEEEENKEKQMLLEEFERRKKARQINVSTDDAEVKATLRQIGEPICLF
GEGPADRRERLRQLLARLGEDAVKKKQEEEKVEVKEKLTETTWYHEGTENLRKAREWIAA
YSIPRAKERLQKAKKEKEEPASIKNAKKQEQYKKLRSLNISCSQIGDTRPLSFCQFSPNS
QMLATASWSGLCKLWSVPDCELIRTLRGHNCNVGSIVFHPQATLSQSESSVNMASCSTDG
TVKLWDLKSDEPIADLEGHAPHRVSRLIFHPSGRFLVTCVFDNSWRLWDLEVREEILHQE
GHSKPVYDASFQCDGSLVATGGMDAFGRVWDLRTGRCIMFLAGHQNSVLTICFSPNGYQL
ATGSADNTVKVWDLRRQKCEYTIAVHTNLVSRVLFEKTYGDYLVTTSYDNSLKVWSHPGW
TPIQTLSGHSGKVMGADISNDDQYIATASFDRTFKLWAPET
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgtcagatgatgaagaaattgcttatgtcaagcgtcagaaaattattcattttggaagt
ttagaagaacaagaaagactaaagcttgctgagaaagaaaaagaaaaagatgaagagagt
gatgataataaagaacccagtgacgatgaggaagctacagctgcaaaagaaacgctgtct
gctggagatgttaatattagtgaagaatatatggaattagaagaagaagaaaacaaagaa
aaacaaatgctcttggaagaatttgaaaggaggaaaaaggctcgtcaaattaacgtatct
acagatgatgcagaagttaaggctactttaagacaaattggtgaaccaatatgtttattc
ggagaagggcctgcagatcgtagagaaaggttaagacagcttttggcaagattaggagaa
gatgcagttaaaaagaagcaagaggaggagaaagtagaagttaaagaaaaactgactgaa
acaacttggtaccatgagggtaccgaaaacttaagaaaggcaagagaatggattgctgct
tattcaatacctagggcaaaagaaaggcttcagaaagctaagaaagagaaagaagaacct
gcttctataaaaaacgctaaaaaacaagaacagtacaaaaaattaaggtctttgaatatt
agttgcagtcagattggtgatacaagaccattatcattttgccaatttagtccaaattca
cagatgcttgcaactgcatcatggagtggtctttgcaaactgtggtctgttccagactgt
gaacttatcagaacactaagaggtcataactgtaatgttggctcaattgtatttcatcca
caggcaaccctgagtcaatcagaaagcagtgtaaatatggcatcatgttccactgatgga
actgtaaaactgtgggatttaaaaagtgatgaaccaattgctgatttagaagggcatgcc
ccacatcgtgtatcaaggcttattttccatccatctggacggtttttagtcacctgtgta
tttgacaattcttggagattatgggatttggaagttcgagaagaaatacttcaccaagaa
ggtcacagtaaacctgtttacgatgccagttttcaatgtgatggatcactcgtagctact
ggtggaatggatgcttttggtcgagtttgggatttacgaacgggcagatgcatcatgttt
ctggcaggtcatcaaaattctgttctcactatttgcttttctccaaatggttatcagttg
gccactggaagtgctgacaatactgtaaaagtgtgggacttaagaagacaaaagtgtgaa
tatacgatagcagttcatactaatcttgtgtctagagtgctctttgaaaaaacatacggt
gattacttggttactacttcttatgataattctctaaaggtgtggtcacatccaggatgg
actccaattcaaacattatctggacatagtggaaaggtaatgggagcagacatatcgaat
gatgatcagtacattgctactgcttcatttgatagaacttttaaactatgggcaccagaa
acttaa

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