Stegodyphus dumicola: 118183417
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Entry
118183417 CDS
T07385
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
sdm
Stegodyphus dumicola
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdm03019
]
118183417
Enzymes [BR:
sdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118183417
Messenger RNA biogenesis [BR:
sdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
118183417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
HA2_C
DEAD
OB_NTP_bind
HA2_N
AAA_19
AAA_22
nSTAND3
AAA_7
AAA_16
ATPase
DUF6959
Rad17
Motif
Other DBs
NCBI-GeneID:
118183417
NCBI-ProteinID:
XP_035208828
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MQRSKRKYKSSHKDAHSSTYVSSDEDDRKKKYISNERRRDFCTQEEEKSNKDQVYMEALR
PNFPWTDYRRTLNKIFFNDRGKIKRNSPEYDEFWLFLSKYQKVQQKAAMKEKQSREGLPG
SICDKLKPKYEFSIDSKELDDMMMRGHLFHDDSESSLTRDHIVEFAYIIKLYFDCLKKQH
EDKIKKLREAQANLPISKYRNDILKAVENNQVVLVAGDTGCGKSTQVPQYLMAAGYDSIA
CTQPRRIACISLCKRVAYETLNEYGSEVGYQIRFEKSKTAHTKILFLTEGLLLRQVSTDP
MLSMYKVVILDEVHERHLSCDFLLGIMKCLTVQRPDLKILLMSATINIELFSEYFSNCPV
IQVPGRLFPIQVKYCPLSVEEQKTLTGKLNPAPYIRIMNLIDDKYPPEERGDLLIFLSGM
TEISIVEEAAKLYAEKTNKWIILPLHSTLSLEEQDKVFDIAPEGVRKCIISTNIAETSVT
IDGVRFVVDSGKVKEMSYHPVCHMQRLQEFWISKASAEQRKGRAGRTGPGVCFRMFSQKE
YDSLMAYTKPEIQRVPLDSLLLQLLSMGLPDARKFPYLEPPDLSSIEEALQNLKNQGALT
EDEALTPMGQMLSKLPVDVTIGKMLIHGCVFSVIEPMLSLAAALSVQSPFTNRSLRDSDM
KAARQNLESDHGDPFTLLNVYGKWLEVKSERHSNSRKWCRRKGLEEQRFYEMNKLRRQFR
DLLKDTELLPDFDVETSSHDRSKRHGELNHLRDMKRQYHQAPRKRKFLKLETVTLEQEDA
DSDDGKIDIHDVDFRISNDKWQVEMLASKSQVSSHREITCLKFIVCSALYPRLAIADVNN
SYKSSADQHFHTKGKPFVVLHPNGTLALQPDLLQLKESDVIEMKHFQTPTPLSRKHQLIS
FLSLLETTKPYLVNCLRIPSAHTLLLLSHSLDTNQDFTRIVCDGWIELRFPVPEEIQTFI
SKAFAIRDSWQQLLQKAFDEFTMDKDSKNAEVLKMGQKVYNLIAYFFHIEIIHSVRRLLA
ADIKNMYIGPQKGNISIAVGLLSEAEDASEHPVKGGLQIKSYLTYNCLLDPDEKHLQYIQ
KHWTCPVCDKEMIATVLDQIRHKEQCEEQNGQDMNSKISQKDDKNPLKKSYFCPDCQEDL
LLTATEILKHKRSHLKS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggagtaaaagaaagtataaatcatctcacaaggatgcacattcttctacttat
gtgagttcagatgaagatgatagaaaaaagaaatatatttctaatgaaaggagaagagat
ttttgtactcaagaagaagaaaagtctaataaggatcaagtatatatggaagcacttcgt
ccaaactttccttggacagattatcgcaggaccctgaataaaatattttttaatgataga
gggaagataaaaaggaattctcctgaatatgatgagttctggttgtttcttagcaaatat
cagaaggtgcagcaaaaggcagctatgaaagaaaagcaatctagagaaggtttacctgga
agtatttgtgataaactaaagccaaagtatgaattttcaattgattcaaaagagttagat
gatatgatgatgcgtggacacttgtttcatgatgacagtgaatctagtttgactcgtgat
cacattgttgaatttgcatacattatcaagttatattttgattgtctcaaaaagcaacat
gaagataaaataaagaaactccgtgaagcacaggcaaatttacccataagcaaatataga
aatgatatattaaaagctgttgaaaacaaccaagtagttcttgttgctggtgatactgga
tgtggaaagtcaacacaagtaccacagtatcttatggcagcaggttatgatagtatagct
tgcactcaaccacggagaattgcttgcatatctttatgcaaaagagttgcttatgaaact
ttgaatgaatatggctctgaggttgggtatcaaataagatttgaaaaaagtaaaacagct
catacaaaaattttatttttgactgagggtttattattaagacaagtatcaacagatcca
atgctgtctatgtataaagttgttattttagatgaagtacatgaaagacatctgtcttgt
gatttcttattaggcataatgaagtgcttaactgtgcaaagaccagaccttaaaatactt
ttaatgtcagcaacaatcaatattgagctgttttctgaatacttttccaactgccctgtt
attcaggttcccggacgcttgtttcccattcaagtaaaatactgtcctctgtcggttgaa
gaacagaaaaccttaactggaaaattaaatcctgctccttacattcgtatcatgaatcta
attgatgataaatatccacccgaggaaagaggagatcttttaatatttttaagtggcatg
acagaaatatcaattgttgaagaagcagctaagttatatgctgaaaaaactaataaatgg
attatccttccattgcatagcactttgtctttggaggaacaagataaggtgtttgatata
gctccagaaggtgttcgtaaatgtattatttcaaccaatattgcagaaacgtctgtaaca
attgatggtgtaagatttgttgttgactcagggaaagtaaaagaaatgagctaccatcct
gtctgtcacatgcagcgcttacaagaattttggattagcaaagcaagtgctgaacagcgt
aaaggtcgtgctggcagaactggacctggagtttgttttcgcatgttttcacagaaggaa
tatgattctttgatggcttatacaaaacctgaaattcagcgagtacctttggattcatta
ctgctgcagttgttatccatgggattacctgatgcaagaaaatttccttacttagaacca
cctgacctttcaagtattgaagaagctctccaaaatttaaagaatcagggtgcacttact
gaagatgaagccttaacacctatgggacagatgctttctaaactgcctgttgatgtgacc
attgggaaaatgttgatacatggttgtgtattttcagttattgaacccatgctatcatta
gctgctgctctgagtgttcagtccccttttacgaatcgttcattaagggactctgatatg
aaagcagcaaggcaaaatttagaatctgatcatggtgaccccttcactttgttaaatgtt
tatggtaaatggcttgaagtaaaatcagaaagacacagcaattctcgtaaatggtgcaga
aggaaaggtttagaagaacagaggttttatgaaatgaataaactcagacgccagtttcga
gatctcttaaaggatactgagctgttaccagattttgatgtagagactagcagtcatgat
agatcgaaaagacatggagaacttaatcatttgcgagatatgaaaagacaatatcatcaa
gctcctcgaaaacgtaaatttctaaagctggaaactgtcactctggaacaagaagatgct
gatagtgatgatggaaagatagatattcatgatgtagatttccgcatatccaatgataaa
tggcaagttgagatgttagcatcaaaaagtcaagtcagcagtcaccgggaaattacttgt
ttaaaatttatcgtatgtagtgccttatatccacgtctggctatagcagatgtaaataac
tcgtataaatcttctgctgatcaacattttcatacaaaaggcaaaccatttgttgtgtta
catcctaatggaactcttgcacttcaaccagatcttttgcagctaaaagagtctgatgta
atcgaaatgaagcattttcagacacctactcctcttagtaggaaacatcaactaattagt
ttcttatctttgcttgagactactaaaccttatttagtgaactgcctaaggataccttca
gctcataccttattgcttttatctcattctcttgatacaaatcaagattttactagaatt
gtgtgtgatgggtggattgaactgcgctttccagtacctgaagagattcaaactttcatt
agtaaagcctttgccattagagattcatggcagcagttgcttcaaaaagcatttgatgaa
ttcactatggataaagattcaaaaaatgctgaagtacttaaaatgggacagaaagtgtac
aatttaattgcatactttttccatattgagatcatacattctgttcgaagacttcttgca
gctgatatcaagaatatgtatataggacctcagaaaggtaatatttcaattgcagtaggt
cttttatcagaagctgaagatgcatcagaacatccagtgaaaggtggattacaaattaaa
agttacttaacttacaactgtctcttagatcctgatgagaaacatctgcaatatatacag
aagcactggacctgtccagtatgtgataaagaaatgatagccactgttttagatcaaata
aggcataaagaacaatgtgaagaacagaatggtcaagatatgaattcaaaaatttctcag
aaggatgataaaaatcctttgaaaaagtcttatttttgtcctgactgtcaagaggacctt
cttcttacagctactgagatacttaagcataaaagaagtcatttaaagtcataa
DBGET
integrated database retrieval system
