Stegodyphus dumicola: 118184067
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Entry
118184067 CDS
T07385
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03013
Nucleocytoplasmic transport
sdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118184067
09122 Translation
03013 Nucleocytoplasmic transport
118184067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdm03019
]
118184067
03041 Spliceosome [BR:
sdm03041
]
118184067
Messenger RNA biogenesis [BR:
sdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118184067
Spliceosome [BR:
sdm03041
]
Complex C
Other components
EJC/TREX
118184067
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118184067
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Flu_PB2_3rd
Motif
Other DBs
NCBI-GeneID:
118184067
NCBI-ProteinID:
XP_035209604
LinkDB
All DBs
Position
Unknown
AA seq
1486 aa
AA seq
DB search
MASGINLDIFKIWGDKERSEFVAVCQSALQKLQNSSLVFGTENSDLNYILYEMCSQCMLG
SIPAESVVSALSEILHLHNEIPSLIADILVVLDTESQSSESHGLRERYFNLLRYCNNKIV
PEFILKERLEFDTLGDAGIMKLLRNTQTKFIKTKTRLFYKQQKFNLYREEMEGYAKLMTE
LAPQTGEEPNVEYTLEVMQSLIGCFNLDPNRVLDVILESFEYKTNLSYFFTQLLHSYFST
SETTSQVIGFKFSFYQQGDSKETPSSLYRITAFLLKSGVMSLGQLYGLLRPDDSKILEEH
KQELTNAQLYVKQLNSLSTNPAEPVKDSVKNEGNRLENEDNQKLGLCAALLDVADWKHAQ
QLMSYFPEFYATSHLFIAKKLCMLIHVLIDDFYKKHNLYPQIRQGKKFELESGVKVKPIE
SFAELFDTVFSMVLSLGPYLHIDPVLMAKIIRLSRYWICSKSSVPDYGMAAISNVIDQSL
LPSLSLLECNCCMAEELWSLLKLFSYQARYMFYFQWKTTANVSHPPLIKVKADTLKRLKY
IMKRLNKDNVKPSGRQIGKLSHSNPGYIFDYILSQIQTWDNLIMPVIDSLKYLTSLSYDV
LAFCVIEALGNSEKDRMKHDGTSISIWLQSLANFGGAVFKKYPIDISGLLQHVANQLIAG
KSLDLLILKEVVQKMAGIEASEEMTAEQLEAMTGGELLRSEGGYFNQLRNVKKSSQRLKE
ALLDQDLAIPLCLLMAQQRQCILFHEQENSHIKLVGKLYDQCQDTLVQYGSFLAYSLNME
DYANRLPPVSVLLNEYSIQPDVAFYLSRPSLNHAISCKFEELKKQDKALKNISSSQSVKK
YIEVVDSVIMPIVQSVKSNQAHKKTWEDLNPQFYVTFWSLSMYDLVVPSGSYEREVNKLK
VILQSEENKDAGKKKKERERCDNLIMKLVEEEKMQQEHCVRVMARLKSEKDDWFQSKAAK
NETITQFLQLCLFPRCIFTPVDAVYCAKFVHLIHCLKTPNFSTLLCYDRVFCDITNTVAS
CTENEANRYGLLLCSMLETVMRWHSDKAIFDKECANFPGFMTKFKVAAQTGDSSVDHVDY
ENYRHVCHKWHFKITKALLKCLDSGDYVQIRNSLLVLRKIAPYFPVIVSLGLALERRIEK
IKAEEKDKRPDIFALATVYSGILKVKKPSLIQESEFHLKETSRANVNTVPIKPEAISRIE
KRESENVPESVKEKVSKTDSKADSNRLKAGSVEKSNSIPSNSQNSGKRSARNDTELNGIE
SRSKIARVKEEKINLENTSPMRREDKSNLKNDIDKIPNSKDDKRDRREERHEKSLISERE
SVESSRDSHSHRHNLEVVEMEREHKRRRVEGTSSRSPREPVERDSRSVDKSKADERNGGR
EKISVEVKSHKEVEAPLEKIKIKEKKTNRKREYPDDGSSELPRRRRPKSEKDDEDSGKRN
MENDRELKSRREDKSPVVYTGSTDRRIDREEKKHHRSSSVSGVKKR
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggtataaatttagatatttttaaaatatggggtgataaagagaggtctgaa
tttgttgcagtctgtcaaagtgctcttcagaaattacaaaattcaagtttagtatttggc
actgagaacagtgacttaaattatattttgtatgaaatgtgcagtcagtgtatgctgggt
agcataccagctgaatctgtagtctctgctctgagtgaaatacttcatcttcataatgag
ataccttcattaattgcagatatcctagttgttttagatactgagtcccaaagtagtgaa
tcacatggattgcgagaacgctatttcaaccttcttcgttactgcaacaataaaattgtt
cctgaattcatacttaaggaacgtttagaatttgatacattgggtgatgcaggtatcatg
aagttactgagaaacacccagacaaaatttattaaaacaaaaactagactattttacaag
caacagaaattcaatttgtatcgtgaagaaatggaaggttatgcaaaacttatgacagaa
ttggctccacagactggggaagaaccaaatgttgaatatacattggaagttatgcagtca
ctaattggttgttttaatttagatccaaacagagttttggatgtcatattggaatcattt
gagtataaaactaacctttcttatttttttactcaattgttgcattcttattttagtaca
tcagagactacaagtcaagtaattgggttcaagtttagtttttatcaacaaggtgattca
aaagaaacaccttcatcattgtatcggataacagcttttcttttgaaatctggtgttatg
tctcttggacagttgtatggattactcaggcctgatgacagtaaaatactagaagaacat
aagcaagagcttacaaatgcccagctttatgttaagcagttaaattccttgtcaacaaat
cctgctgaacctgtcaaagattctgttaaaaatgaaggtaataggcttgaaaatgaagat
aatcagaaattgggtctatgtgctgcattattagatgttgcagattggaaacatgctcag
caacttatgagttattttcctgaattttatgctacatcacatttgtttatagctaaaaag
ttatgcatgttgatacatgtacttatagatgatttttataagaagcataatttgtatcct
caaattaggcagggaaagaaatttgaactagaatctggagttaaagtaaaaccaattgaa
agttttgctgaattatttgatacagtattcagtatggtgctttctctgggcccctattta
cacattgatccagttctcatggcaaagataattcgtctctcaaggtactggatttgttca
aaatctagtgttcctgattatggaatggcagcaatttcaaatgtgattgatcagtctctt
ttgccatcattatcattactggaatgcaattgttgtatggctgaagaactttggagttta
ttaaaacttttttcatatcaagccaggtacatgttttatttccagtggaagactactgca
aatgtttctcaccctcctttgattaaagtgaaggctgatacattaaaaagactgaaatat
attatgaaacgattaaacaaagataatgttaagccatctggaaggcaaattggaaaatta
agtcacagcaatccaggttacatatttgattatattttatcccagattcagacatgggat
aatttaataatgcctgttattgattctttaaagtacttaacatcattgtcttatgatgtt
ttggctttctgtgttattgaagccttgggaaattctgagaaagaccgcatgaagcatgat
ggaacaagcatatccatttggttacaaagtctggcaaattttggaggtgctgtgtttaaa
aagtatcccatagatatttctggccttctgcaacatgttgctaatcagttaatagctggt
aaaagtcttgatttacttattttaaaagaagttgttcagaaaatggctggaattgaggct
tcagaagaaatgactgctgaacagttggaggcaatgactggtggagaattgttgagatca
gaaggaggctattttaaccaactgagaaatgttaagaagtcatcacaacgtttaaaagaa
gctctgttagatcaagaccttgcaattccgctatgcctgctcatggctcaacaaagacaa
tgtattttatttcatgaacaagagaatagccacataaaacttgtagggaagttatatgac
caatgccaagatacacttgtgcagtatggtagttttctagcttatagtttaaatatggaa
gattatgcaaatagattaccacctgtttctgttttgttgaatgaatattctattcaacca
gatgttgctttttatctttctagaccatccttaaatcatgccataagttgcaagtttgaa
gaactcaaaaaacaagacaaagcactgaaaaacataagtagctcccaaagtgtgaagaag
tatatagaggttgtagattctgtcattatgccaattgttcagtctgtaaagtccaatcaa
gcccacaaaaaaacatgggaggatttgaatccacagttttatgtaacattctggtctctg
agtatgtatgaccttgtagttccttctggaagttacgagcgtgaagtaaataaattgaaa
gttattctgcaaagtgaagaaaataaagatgctggtaaaaagaagaaggaaagggaaaga
tgtgataatttgattatgaaacttgtagaagaagagaaaatgcaacaagaacattgtgtc
cgtgttatggctcggttaaagagtgagaaagatgactggtttcagtctaaggcagcaaaa
aatgaaaccattactcagtttttgcagctgtgtttatttccccgttgtatatttacacca
gttgatgctgtatattgtgctaaatttgtccatctcattcattgcttaaagacacccaat
ttctctactctactctgctatgatcgtgttttctgtgatataactaacacagttgcatct
tgtacagaaaatgaagcaaataggtatggattattgttgtgctctatgttggagactgta
atgagatggcatagtgacaaagctatatttgataaagaatgtgcaaattttcctgggttc
atgacaaagtttaaagttgctgcccagactggtgattcatctgttgatcatgttgattat
gaaaattatcgccatgtatgccataaatggcattttaaaataacgaaagctcttttgaag
tgcttagattctggagattatgttcagattcgtaacagccttttggttttgcgaaaaatt
gcaccatattttcctgttattgttagtcttggcttagcattagaacgacgtatagaaaaa
attaaagctgaggaaaaggataagcgacctgacatttttgcattagctactgtctattct
ggaattctgaaagtcaagaaaccttctttaatccaagagagtgaatttcatttaaaggaa
actagtcgagcaaatgttaatactgtccctattaaacctgaagcaatatctagaattgag
aagagggaaagtgaaaatgtgcctgaatctgtgaaagaaaaagtgtctaaaacagattca
aaagctgactcaaatcgactaaaagcaggctctgtagaaaaatcaaattctattccatca
aattcacagaattctggaaaaagaagtgcacggaatgacacagaattaaatggcattgaa
agccgaagcaaaattgcgcgagtgaaagaagaaaagattaaccttgagaacacaagtcca
atgagacgggaagataaatctaatctgaaaaatgatattgacaaaattcctaactctaaa
gatgataaacgagatcgtagggaggagaggcatgagaaatctttaattagcgagagagag
agtgtagaatctagtagagattctcactctcatcgtcataatttagaagtggtagagatg
gaaagagagcataaaagaagacgagttgaaggaacttcttctagaagcccacgtgagcca
gtagaaagagactctcgtagtgtggataaatcaaaagcagatgaaagaaatggaggacga
gagaaaatatctgttgaggttaaaagtcacaaagaagtggaagctcctctagaaaaaatt
aaaattaaagaaaagaaaacaaataggaaaagggaataccctgatgatggttcctctgaa
cttccaagacggagaagaccaaaatcagagaaagatgatgaggattctgggaagcgtaat
atggaaaatgatcgtgaacttaaatcacggagagaagacaaatcacctgttgtgtatact
ggcagtaccgacagacgtattgatcgtgaggagaaaaagcatcatcgctctagttcagta
tctggagtgaagaaacgatag
DBGET
integrated database retrieval system
