Stegodyphus dumicola: 118184361
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Entry
118184361 CDS
T07385
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118184361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdm03400
]
118184361
DNA repair and recombination proteins [BR:
sdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
118184361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
DUF2452
AAA_27
DUF5798
DrrA_P4M
Motif
Other DBs
NCBI-GeneID:
118184361
NCBI-ProteinID:
XP_035209911
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MSDICDAFISFYRSLPIVKGTCRIFERNDTYSFYEDDAKLVNKEVLKASKLKKMGTGAES
LSYVNISKSNLIQALKYLVFVQQYKIEILKNNGTAKSPQWVVNCKASPGNLTTIEDLLFG
DCETYVHESRGLMAIKMILEGPEVILGIAHCDTVLREIQICRVVDKLDLTNFQSVLVQLS
PQECLLPVVASNMKTENSARLTLEKILKAHNIAITEIKPGDFLFGDLTQDLKRLLQDTDF
NYLILDEPEKRVALHSVAAVIKYLQLLSDEHNFDQFTLSVFKSELYAKLDAQAISGLALF
PQNTKDFQEKDFLFGYLNSCFTGPGKRLLVQWIKQPLMDKRKLEERLDIVETFVNDFSLR
NETSRYISKFPDLETLSRKIQRHKANLQDLYRIYLMILQLPNLTSTLSKYDGLHADALKA
NFIEDLQERISDFENFKSMIESVLDFEALKNKEFVVKAEYDDKLLELRDQISALQDSINE
THDDVKQDLDLQSVKLEYAKNIGYIFRVTRKEEKNLRNKKGYTVIDTKTSGVRFQSASLS
NLNSKYLSLKTSYENLQKSLVDQIIDVAVSYTHVMKLLSHTIAWLDVALAFARVSVDGAK
PYVRPKLKEKGECQIILQQARHPILESKLGNFIPNDVEISKEKHIFYFVTGPNMGGKSTY
IKSVALNVLLAQIGCFVPCDEATISLTDAFLTRIGACDKSSKGISTFMYEMLEIQMIIRS
ATSSSLLIIDEMGRGTSTYDGFGLSWAISRHIAEVIKSPCLFATHYHELTELSKTVPIIG
NLHVEALSMEGDIIFLYRVKPGCSDESFGIHVARLAKFPETVIKKAEQTLKELDETHISL
EEIASKFSSVPEGEVIISFNFYRIK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatatttgtgatgcattcatatccttttatagaagtttgcccattgtgaaggga
acttgcagaatatttgaaagaaatgatacttattcattttatgaagatgatgctaaattg
gtgaacaaagaggttttgaaagcttccaagctaaaaaaaatggggacaggagctgaatct
ttaagttacgtaaatatatccaaatcaaatctgatccaggctctgaagtatttggttttt
gtgcaacagtacaagatcgaaattttaaaaaataatggcactgctaaatcacctcagtgg
gttgtaaattgtaaggcatcaccaggtaatctgactactattgaagacctgctttttgga
gattgtgaaacatatgtacatgaatcaagaggattaatggccataaaaatgattttagag
ggacctgaagtgattcttggaatagctcattgtgacacagtactccgtgaaattcagatt
tgccgagttgttgacaaattagatttaaccaattttcagtcagttttagtgcagttaagt
ccgcaagaatgtcttctgcctgtggttgcttcaaatatgaagactgaaaattctgcaaga
cttactcttgaaaaaattttgaaagcacataatattgccatcacagaaattaaacctggt
gatttcttgtttggtgatttgacgcaggacttaaaacgcttgcttcaggacactgatttt
aactacttaattttagatgagccagaaaagagagtggctttgcattctgttgcagcagtt
ataaaatatttgcagcttttatctgatgagcacaattttgatcagttcactttatcagtt
ttcaaatcagaactttatgcaaaattagatgcacaagccatcagtggtcttgcattattt
cctcaaaatacaaaagattttcaggaaaaagatttcctttttggctatctgaattcttgt
ttcactggacctggaaaacggcttctggtgcagtggattaagcagccactaatggataag
cgaaaattagaggaaaggttagatattgtcgaaacttttgttaatgacttttcattgaga
aatgaaacatcgaggtatatttccaagtttccagatcttgaaacattgtcacggaaaatt
cagagacataaagctaatttacaggatttgtacagaatttatttgatgatactccagtta
ccaaatctgactagtacactttctaaatatgatggactacatgctgatgctttgaaagca
aattttattgaggacttgcaggaaaggatttcagattttgaaaattttaaaagtatgata
gagtctgttttggattttgaagctttgaaaaataaagaatttgtcgtgaaagctgaatat
gatgataaactcttagaactgagagatcagatttctgctttacaagattccataaatgaa
actcacgatgatgtgaaacaagacttagatctccaatctgtgaagttagaatatgccaaa
aatattggctacattttcagagtgacaagaaaggaagaaaagaatctgagaaataaaaaa
gggtacactgttattgatacaaaaacgtctggtgttcgtttccagagtgcttctctaagc
aatttaaattcaaagtacttgtctttaaaaacatcatatgagaatctacaaaagagcttg
gtggatcaaatcattgatgtagcagtgtcatatacccatgtcatgaagcttttgagtcat
accattgcatggctagatgtagcacttgcatttgctcgagtttctgtcgatggagcgaaa
ccttacgtacggcccaaacttaaagaaaaaggagaatgtcaaattattctgcaacaagct
cgtcatcctattctagaatcaaaattaggaaatttcattcctaatgatgttgaaatatct
aaagaaaagcatatattttattttgttactggtcctaatatgggagggaagtcaacttat
atcaaatctgttgcgctgaatgttcttctggctcaaataggatgttttgtgccttgtgat
gaagcaactatctccctcacagatgcctttttgactaggattggtgcttgcgataaatct
tcaaaaggaatctcaacctttatgtatgaaatgcttgaaattcaaatgataattaggtca
gctacatcttcttcattactcataatagatgaaatggggcgtgggacatctacttacgat
gggtttggcctctcttgggcaatatcaaggcatattgcagaagttataaaatctccatgt
ttgtttgcaactcattatcatgaattaactgaattgagcaaaactgttcccatcataggc
aatcttcatgttgaagctctttctatggaaggagatattatttttctgtatcgtgtgaaa
cccggatgctctgatgaaagttttggtattcatgtcgcaaggctagcaaaatttcctgaa
acagttattaagaaagcagagcaaacattgaaggagttggatgaaactcatatttctctt
gaagaaattgcaagcaaattttcatctgttcctgaaggagaagtaataattagtttcaat
ttttatagaatcaaataa
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