KEGG   Stegodyphus dumicola: 118184791
Entry
118184791         CDS       T07385                                 
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like
  KO
K12815  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
Organism
sdm  Stegodyphus dumicola
Pathway
sdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118184791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sdm03041]
    118184791
Enzymes [BR:sdm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     118184791
Spliceosome [BR:sdm03041]
 Complex C
  Other components
   Step II factors
    118184791
SSDB
Motif
Pfam: OB_NTP_bind
Other DBs
NCBI-GeneID: 118184791
NCBI-ProteinID: XP_035210412
LinkDB
Position
Unknown
AA seq 1546 aa
MNNYRGRGARYHGLKSHQRNSPANGRPNEILEDSFDSARDNRQDYENLQSDFHQSQTDAS
RNAFHHRNRIQQQKRQQGKFRRRPPNRCKNSNVNQPRIFNKGQETSNKTENAEFPNFPQL
NEIKSDDDYQLNRSHSPFEVRNSRSTSPKSVKSCSNDSNSDACSSISDSYASVKTLKFGN
VHFNVNNESSDLNNLKSNQQSFLFESHKKYESPNDRQEGVKNYNKNNKFNCNDTFSIFDS
NKIELVNTSDFEKEILRNSSDQLFKGTNESLFSFSCGQSVKDNLESVKDNSSKSVRNDLT
EFSKNTKELPFSLILSRRCEHDCDSVNQISGLDPRNKSTSFQKERNLENRFSKHNFKSQF
SREVTSYNDEAQKRITGNLHALEGPYDSDFQFQNSKGVNYDGSNISADLEKINKLLNQWK
PSDFILEYRQKIDKHADKCVQQNLREKEKICTLFSQKEYPEVLKNLLNNLTMQQKEFDSI
ISDAKVQLSHLHSNNVVDVIKEAHLIEENVLKECKLFVKFFPAYAIKSDFLKSITDKQVT
IIVGDNSYCFNISLPFFVKGKFDHYVISCEPSELLSMRLLQSLNSIFQDEIASDLLPINE
SCVGDHIFVVTEENLLNFISHNRDDFNLFVILNISLKRSVLTDVLLANLKDLLSKQKKSK
LVLLLSLYDNPTKFESYFSSETVSVLKVQNLIFPVQTVWKQNLLSPVDDYISEVAETALA
ICTLHDSGDVLAFLPTISDADLASSSLKKLLIKFNYCDIELILEHEINLYDYCFQKPNEK
VSPKRKIFFVTSSAEMFVMPSIRFIIDSGLKKEYVYDQCKCIDVFSLTFNSHSKAKLRKS
LAGISNFGICYRIYSKENYRKEMLHKENPEILTLNPFNTFIKIFQYNPDKAEDIQFVEPL
PDDMRRDTMDRLRKFNAIKNKNLTALGKDMVKLPYAARYSKLLLMGIQWGLAFEAVVLFS
FFSSEMPIFQLPQDEEQKKAIDAQKFQLIQSNSDTLTYLYIYEKWVENGRSSEWCNDCYI
LPKTLESVSAKIDEVCKTIADCLKKYIEPKFADEKNYSDLTEMLVECFQDNLCVFTGRYE
SGFRVLMSNSIAHLDTTSVICQKANVPQYIIFDKIVSKDRDYMIHVTAVPGELIDQLLTK
ELLDYNYSDMFENNLIQRTIPVGEKLMNQILLEKRGQNLKKIEEDIKKETGSDFIFIEPC
VEKGCIYVYAVTDAIDYVMCTVEDTLKNKKEAILNEQDKNVLELKKGNNKVYVKVNWIRG
ALIKQLEIESEVKQLLVNKSDCILDEFSNKPCSAFDDFIHLTFIRRPCDRAFITLRNDAD
FFKARKLTMRRIHSHVLKTDIYMEVGDRKNQLLVSDLPPETTKESFKQAFQILLHDVLID
NFQLEYKFPFGTPNQDARFIKDAITKKCKELKIADFDILISEPAAMDTFMEASIVIQSNQ
DLNFLAVEFSNTDFGQRKLIAAPEYGSIIKCDKRVWNALKKRFNIELEKLTNQLHLDKSL
FRLEYGFEIEETYSFKLLSKSVTDILNGCAQNCFNIFLKTYINSSK
NT seq 4641 nt   +upstreamnt  +downstreamnt
atgaataattacagaggtagaggtgcaaggtatcatggcttgaaaagtcatcaacgtaat
tcaccagcaaacggcagaccaaatgaaattctagaagattcctttgatagtgccagggat
aataggcaggattacgagaatttgcagtcagattttcaccaatcacagactgatgcctcg
agaaatgcatttcatcatcgtaacagaattcagcaacaaaaaaggcagcaaggcaaattt
cgtagaagacccccaaatagatgcaagaattcaaatgttaatcaacctagaatatttaat
aaaggccaagagacttcaaacaagacagaaaatgctgagttccctaatttccctcagtta
aatgaaattaaatcagatgacgattatcagctaaatagatcacattctccatttgaagtc
agaaattccagaagcacatctcctaaaagtgtaaaatcatgttctaatgacagtaactct
gatgcttgtagtagtatatctgattcttatgcttctgtgaaaacattaaaatttggtaat
gtgcattttaatgtaaataatgaaagctcagatttaaacaatttaaaatctaatcaacaa
tcctttttatttgaatcacataaaaagtatgaaagccctaatgacagacaagaaggtgtt
aaaaattataataaaaataacaaatttaactgtaacgatacttttagcatatttgattct
aataagatagaattagtgaatacctcagattttgaaaaagagattttaagaaatagctct
gatcagttatttaaggggactaatgaatcccttttttccttttcgtgtgggcaatcagta
aaggataatcttgaaagtgtgaaagataattcatcaaaatctgtaagaaatgatttaact
gaattttccaagaacacgaaagaattgcctttttctcttatcttgtcacgaagatgtgaa
catgattgtgattctgtaaatcaaattagtggcttagatcctagaaataaaagtacttca
tttcaaaaggaacgtaatctagaaaataggttttcaaagcataattttaaatctcagttt
tctcgggaagtaacaagctataatgatgaggctcagaaaagaataacaggcaacttgcat
gcacttgaaggcccatatgactcagattttcagtttcagaatagtaaaggtgtaaattat
gatggtagcaatataagtgcagatttagaaaagatcaataaattattaaaccagtggaaa
ccatcagattttattctagaataccgtcaaaaaattgataagcatgctgacaaatgcgtg
caacagaatctgagagaaaaagaaaagatttgtactttgttttctcagaaagaatatcct
gaagtgttaaaaaaccttctaaataatctgacaatgcagcagaaagagtttgacagtatt
atttccgatgcaaaagtgcagttatcacatttgcatagtaacaatgttgtagatgtcata
aaagaagctcatttaattgaagaaaatgttttgaaagagtgtaaactttttgtaaaattt
ttccctgcatatgctataaaatctgattttttaaaatctataactgataagcaagtaacg
attatagtaggagataattcttactgttttaatatctcattgccattttttgtgaaagga
aaatttgatcattatgtaatttcttgtgaaccatcagagcttttgagtatgaggttgctt
caaagtttaaatagtatatttcaagatgagatagcttctgatttattgccaattaatgaa
agctgtgtgggagatcatatttttgttgttactgaggaaaacctcttaaattttatttca
cataaccgtgacgatttcaatctgttcgtcattttaaacatctctttaaaacgatctgtg
cttactgatgtattgctagccaatttgaaagatttattgtcgaaacaaaagaaatcaaaa
cttgtactgcttctttcactctatgataatcctacaaaatttgaaagttacttttcttca
gaaacagtttctgttcttaaagtgcaaaatcttatcttcccagttcaaactgtgtggaag
caaaatttattgtctccggtagatgattatatcagtgaagtggctgaaacagcactagct
atttgtactttgcatgatagtggtgatgtgctggctttcttacctacgatttcagatgca
gatttggcttcttcatccttaaaaaaattgttaattaagtttaattactgtgacattgaa
ttgattttagaacatgaaataaatttatatgactattgtttccaaaaaccaaatgaaaaa
gtatcaccaaagagaaaaattttcttcgtaaccagttcagcagaaatgtttgttatgcca
tctatccgttttatcattgattctggtttgaaaaaggaatatgtctatgatcaatgtaaa
tgtattgatgtgttttcactaacatttaattctcatagtaaagctaaactgcgaaaaagt
ttagctggtatttccaactttggcatttgttatcgcatatacagtaaagaaaattatcgt
aaagaaatgttacataaagaaaacccagagattttgactttaaatccatttaatactttt
ataaaaatatttcaatataatccagataaagctgaagatattcagtttgttgagccattg
cctgatgatatgagacgagatacaatggatcgtttaagaaaattcaatgcaattaaaaat
aaaaacttaactgctctgggtaaagatatggtgaaacttccttatgctgctagatattcc
aaattacttttaatgggcattcagtggggtttggctttcgaggcagttgtccttttttct
tttttttcttctgaaatgccaatatttcagcttccccaagatgaagaacagaaaaaggca
atagatgcccagaaattccagctaattcaaagcaatagtgatacacttacgtatctctat
atttatgagaaatgggttgaaaatggccgtagttcagaatggtgtaatgactgttacatt
ttgccgaagactctagagagtgttagtgcaaaaatagatgaagtatgtaaaactattgca
gattgcttaaaaaaatacattgaaccaaaatttgcagatgagaaaaattattctgatcta
actgaaatgttagttgagtgttttcaggataatttatgtgtttttacaggacgttatgaa
agtgggtttagagttctgatgtcaaatagtattgcacatttagatacaacttcagtaatt
tgccaaaaagctaatgtaccacaatatattatttttgataagattgtatctaaagatagg
gattatatgattcatgtaacagcagttccaggtgaattaatcgaccagcttcttacaaag
gaattattggactacaactattcagatatgtttgaaaataatttaattcagaggaccatt
ccagttggagaaaaattaatgaaccaaattctgcttgagaaaagaggtcaaaatttaaaa
aaaattgaagaagatattaaaaaagagacgggtagtgactttattttcatcgaaccatgc
gttgaaaagggttgtatttacgtgtatgctgtgacagatgccattgattatgtgatgtgt
acagtggaagatacactaaaaaataaaaaggaagctattttgaatgaacaagataagaat
gttttagagttaaagaaaggtaataataaagtgtatgttaaagtaaattggataagaggt
gctttaattaaacagcttgagattgaatcagaagttaaacagcttttagtgaataaaagt
gattgtatcttagatgaattcagtaacaagccatgttctgcttttgatgattttatccat
ctaacattcatacggcggccttgtgatagagcatttataactttaaggaatgatgcagac
ttttttaaagctcgtaaactgacgatgaggcgcattcattctcatgtattaaagactgat
atttatatggaagtgggtgataggaagaatcagcttcttgtttccgatcttccacccgaa
actaccaaagaaagttttaaacaggcttttcaaattctcttacatgatgttctaatagac
aactttcaattagagtacaaatttccttttggaactccaaatcaggatgcaaggtttata
aaagatgcaattactaagaaatgtaaagagttaaaaatagctgattttgatattttaatc
tctgaaccagcagcaatggatacatttatggaagcttccattgttattcagagtaatcaa
gatttgaattttcttgctgtagaattttctaatacagattttggccagcgaaaacttata
gctgcccctgagtatggttcaattataaaatgtgataaacgtgtatggaatgcattaaaa
aaacgttttaatatagaattagaaaaacttacaaaccaactgcatttagataaaagcctt
ttcagattagagtatggttttgaaatagaagagacatattcttttaaattattgtctaaa
agtgtgactgatattttaaatggttgcgcacaaaactgttttaatatctttttgaagaca
tatataaatagcagtaaataa

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