Stegodyphus dumicola: 118186083
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Entry
118186083 CDS
T07385
Name
(RefSeq) nuclear exosome regulator NRDE2-like isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
sdm
Stegodyphus dumicola
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdm03019
]
118186083
Messenger RNA biogenesis [BR:
sdm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118186083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Ku_PK_bind
Motif
Other DBs
NCBI-GeneID:
118186083
NCBI-ProteinID:
XP_035211979
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MESDSNLTKPGTLFPAYSSANQVQEKKEDRDWLCNSSFTPATYEFSCQQQLKTEECNIDI
SETTETEKHILPKQTKERKKQHVSDPIKHQVPDCDSIRKQLNKKTFIEETGLSFERAYRL
DPKCDYENLNFDCFERKNIAKYKMKFGVPFGLSLEEFAQWPQPMQVKKDVLFRYFGKKAL
KLFNKSGPPEVIRGKELPSFISGALDFIPISTVSREEVSLLNDTKVVFDGISVDWKVQSS
DKYTNAVLKNEQAIESSVESDIRNKTIYFNKKLLKSPNDVQLWLDFVEFQDEVCHADRKS
ESAYNESAIFEKKISIFDKALKYNPKSVELHIAKLNLCRKVWKIDKLISLWDDLIFMNPN
NPEVWQSYLFFVLTNLAYFNTPRIVKLYSKCLRTLSNLNEGIIQSHEAPPNLTLFMLDIF
SQLCFALRSCGYSERAIATFQALIEFNFFCDPSTRLLSVSEKITCFEPFWDSGAARIGED
EAIGWAATVSKAKIVSNKIVSESDLNSFEDDILYEKLPLGQTWLKFERLREVHHWLPWRP
NPDFDQTDDDVDDMERTVSFDDVSRFLFNITDEKDKFLLLVKFLEFLGFSTHMLFCSESS
VSKNCFQVEVKNFETISEILSESVFSNQTSNPLSFPRSEWTQDKINFINNIFSLIMDKFS
SHYQTLLSRMWLKFRKIIITNENSENYDRDISDLKKFAKSMLKKNENRNSLLLWSEYIEI
ELLSKLKSNAKNTFETLLVSSSAAISEESSMFKEVWYFIRSYIDLNIGLRNHIFKKKEFC
QDELLWILTHVGSKETFVPYLNQTVKPTSVLRAVSGFKQFLDQELSSLRNLDPALCYCLD
PRPYLVLDCIKCFAFLQYFTQGIDAALQIFKNYSVFLEKKISVSLKRHILEQFCVLQTEL
LNIHTWNSISSIKPLQSYLYESINTYPSNAVLLYYLVKLRNASSVVGPTRRFFAKLLKNQ
NKFQPVIWIFALASELSICYSVLSQKSFETDQLNTFENIVSCWGIKWKIQGLYEKALASE
SYCFIPVLWRSYLKYEILNGETSKAKGIFHEAIQNCGWSKELLMDGIKYFPEDVQQIIDF
MIEKQIRIHTPLEEVTLLMEHGIQET
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgatagtaatttaacaaaaccaggcacattgtttcctgcttattcttctgct
aatcaagtgcaagagaaaaaggaagatagagattggctgtgtaacagtagcttcactcct
gctacttatgaattttcctgtcagcagcagttgaaaactgaagaatgtaatattgatatc
tctgaaactactgaaactgaaaaacacatacttccaaagcaaaccaaagaaagaaaaaag
cagcatgtttctgatcccatcaaacatcaagtaccagattgtgattctattcgcaagcag
ttgaacaagaaaacatttattgaagaaactggtttatcttttgaaagagcttaccgactt
gatcccaaatgtgattatgaaaacttaaattttgattgttttgaaagaaagaatatagct
aaatacaaaatgaaatttggagttccatttggtctgagcttagaggaatttgctcaatgg
ccacaacccatgcaagtaaaaaaggatgttctgtttcgttattttggcaaaaaagcttta
aaactgtttaacaaaagtggtccacctgaggtgattagaggaaaagaattaccatctttt
atcagtggagctttagattttattcctatttcaacagtgtctagagaagaagttagcttg
ttaaatgatacaaaagtagtatttgatggtatatctgttgactggaaagttcagtctagt
gataaatatacaaatgctgtgttaaaaaatgagcaagctattgaatcctctgtagaaagt
gatatacgaaataaaacaatctatttcaataaaaaattattgaagtcgcccaatgatgta
caattatggcttgattttgttgagtttcaagatgaggtgtgccatgctgatagaaaatct
gaaagcgcatataatgaatctgccatatttgagaagaaaatatctatttttgacaaagct
ctaaaatacaatccaaaatctgtagaattacacattgctaaattaaatttgtgtcgaaaa
gtatggaaaattgataaacttatttcattatgggatgatttaatcttcatgaatccaaat
aatcctgaagtatggcagagttatttgttttttgttttgacaaatttagcatactttaat
actcctcgcattgttaaattgtacagtaaatgtctgaggacgttatcaaacttgaatgaa
ggtataattcaatcacacgaagctccacctaatttaactctttttatgctagatattttc
agccagttgtgttttgctcttagaagttgtggttattctgaaagagctatagctactttt
caagctcttattgaatttaatttcttttgtgatccttcaactcgactactttctgtatcg
gaaaaaatcacttgctttgaaccattctgggacagtggtgctgctcgtattggtgaagat
gaagctattggatgggctgcaactgtttcgaaagccaaaattgtgtcaaacaaaatagtt
tcagaatcagatttaaatagttttgaagatgatatattatacgaaaaattgccacttgga
caaacatggttaaaatttgaaagactaagagaagttcatcattggttgccatggagacca
aatcctgattttgatcaaactgatgatgatgttgatgatatggaaagaactgtttctttt
gatgatgtttctagatttctttttaacattacagatgaaaaagataaatttttattgcta
gtcaaatttctagaatttttaggcttcagcactcatatgttattttgctctgaatcttct
gtgagcaaaaattgttttcaagtagaagttaaaaattttgaaactatctccgagatatta
agtgaatcagtttttagtaaccagacctcaaatccactttcttttcctagaagtgaatgg
acacaagataaaattaatttcattaataatattttttccctgatcatggataagttttca
tctcactatcaaacactgctttcacggatgtggttgaagtttcgtaaaattattattaca
aatgaaaatagtgaaaattatgacagagatatttctgaccttaaaaagtttgcaaagtct
atgctaaagaaaaatgagaatcgaaattctttactgttatggtctgaatatattgagatt
gaattgctgagtaaattaaaatctaatgctaaaaacacttttgaaactttgttggtgtct
agcagtgcagcaatttcagaagaaagctcaatgtttaaggaagtatggtattttattcgt
tcttatatagatttaaatattggtttacgaaatcacatctttaagaaaaaagaattctgc
caagatgaattgctgtggattttaacacatgttggatctaaagaaacttttgtcccatac
ttgaatcaaactgttaaaccgacttcagttcttagagctgtttcaggatttaagcagttt
ttagaccaagagttaagttccttgagaaatttagatcctgccctatgttattgcttagat
cctcgtccatatttagtgttggactgtataaaatgctttgcttttctgcaatattttact
caaggtattgatgctgctttacagatatttaagaactattcagtatttctagagaagaaa
ataagtgtatctctgaaaaggcacattttagaacagttttgtgttttgcaaactgaactt
ctgaatattcatacgtggaattccatatcttcaataaagcctttgcaatcttatttgtat
gaatctataaatacatacccaagtaatgctgtgcttctgtactaccttgtgaaattaagg
aatgcatcatctgtagttgggcccacaaggaggttttttgccaaattgcttaaaaatcaa
aataaatttcaacctgtgatatggatttttgccttggcatcggagctttcaatttgttac
tcagttttgtcacaaaagagttttgaaactgatcaactaaacacatttgaaaatattgtt
tcttgttggggaataaaatggaaaatccaaggattgtatgaaaaagctttagcatctgaa
tcatattgttttattcctgttctttggcgatcttatctaaaatatgagattttgaatgga
gaaacatcaaaagctaaaggtatctttcatgaagccatacaaaactgtgggtggtcaaag
gaattattaatggatggaatcaagtattttcctgaagatgtacagcaaataatagatttt
atgattgaaaaacaaatccgtattcataccccattagaagaagtgacacttcttatggaa
catggtatccaagaaacttaa
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