KEGG   Stegodyphus dumicola: 118186465
Entry
118186465         CDS       T07385                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
sdm  Stegodyphus dumicola
Pathway
sdm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118186465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdm03019]
    118186465
Enzymes [BR:sdm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     118186465
Messenger RNA biogenesis [BR:sdm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     118186465
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N CbiA AAA_16 nSTAND3 AAA_18 AAA_22 AAA_24 TniB ATPase_2 AAA PAC2 AAA_14 ATP_bind_1 AAA_35 ATPase AAA_29
Other DBs
NCBI-GeneID: 118186465
NCBI-ProteinID: XP_035212460
LinkDB
Position
Unknown
AA seq 432 aa
MLEDTNTNTNTNTDSDAQEFKLEEQTELRFEVEANCKVSLELKSGTAEVFGTELVKNKKF
NFSSGEKVAVFTWHGCTLELIGKPEVAYISKETPMIVYANIHAALEQMRVKAEKEDGKGP
VVLVTGPSDVGKTTLCRILLNYAVRLNRRPVFVDLDVELSSISIPGTVAALPVERVADIE
EGFSSTAPLVFHYGHKSPGNNIILYNTLLSRMAEIIATRAVEGNRRAGVSGCIINTCGWV
KGDGYQSIKHAAKAFEVDVILVIDQERLYNELVRDIPKFVKVVFVPKSGGVVERNQIARA
EAQDSRIRQYFYGGLKTHLYPHSFDVKFSDVKIYKIGAPSVPDSCMPLGMKAEDNRTKPV
HVQVGPNILHHILSVSFAESVDDDVITSNIAGFICVTKVNVERQVITVLAPQPRPLPKTV
LLIGDVQFMDAH
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgctagaagatacgaataccaatacaaatacgaatacggattcggatgcacaagaattt
aaacttgaagagcagactgagttacggtttgaagttgaagctaattgtaaagtgagttta
gaattaaaaagtggaactgctgaagtgtttgggacagaattggtcaaaaataaaaaattc
aatttttcttccggtgaaaaagtagcagtatttacatggcatggctgtactctagaatta
atagggaaacctgaagttgcttatatttcgaaagaaactccaatgattgtatatgctaac
atccatgcagcgttagaacaaatgcgagtaaaagctgaaaaagaagatggaaaaggacca
gttgtgctcgttactggcccttcggatgtcggtaaaacaactttatgtcgtattctgtta
aattatgctgttcggttgaataggcgacctgtatttgtggacttggatgttgagttatca
tcgatatcaatacctggtacagtggctgcattacctgttgaaagggttgctgatatcgaa
gaaggtttttcctcaacggctccattagtttttcactatggccataagagcccaggtaat
aatatcattttatataataccttattatcgagaatggcagaaataattgcaactcgagct
gtggaggggaaccgaagagcaggtgttagtggttgcataataaacacatgtggttgggtt
aaaggtgatggatatcaatctatcaaacatgcggcaaaagcatttgaagtagatgtaata
ttagttattgatcaagaaagactttataatgaattagttcgagatataccaaaatttgtg
aaagttgtatttgttccaaaatctggtggagttgttgaacgtaatcagatagctagggct
gaagctcaagatagtcgtataagacagtatttttatggtggcttaaaaacgcacttgtat
ccacattcatttgacgttaaattttcagacgtgaaaatatataaaataggagctccatca
gtgcctgattcttgcatgcctttgggtatgaaagcagaagataacagaactaaacctgtt
catgtgcaggttggcccaaatatattacatcatattcttagtgtaagttttgcagaaagt
gtagatgatgatgtcattacctctaacattgccggttttatatgtgttactaaggttaat
gttgaacgtcaagttattactgttctggcccctcagccgagacctctaccgaaaactgtt
cttcttataggtgatgttcagtttatggatgcacactaa

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