Stegodyphus dumicola: 118186478
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Entry
118186478 CDS
T07385
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03013
Nucleocytoplasmic transport
sdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118186478
03015 mRNA surveillance pathway
118186478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdm03019
]
118186478
Enzymes [BR:
sdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118186478
Messenger RNA biogenesis [BR:
sdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118186478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
118186478
NCBI-ProteinID:
XP_035212469
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MISVFLSMSLSLHMLEFTEIYILTFTFSIGFIMADVDDWGLSSDIQEKGISKLVDNLNLD
DPIPPPVPPPIPPPKIPDEASKDDDEKDDEPELNPAEISVMKKLVRSHLIEVSHDIDIQR
NPNSSLYSVKSFEELNLRPELLKGVCGMGFNSPSKIQETALPTLIADPPQNMIAQSQSGT
LKTAAFLLASLSRVDTNLKYPHMLILSPTYELAMQTGKVAKQMAKFCPNIEFCFAVRGEV
LQRGEKITAQFMIGTPGKVYDWAMRYKCFDLRKIKVFVLDEADVMISTQGYQDQSIRIHK
QLPKDCQMMLFSATYSEEIMQFAELIVSDPIIIKLKREEDSLDNIYQYYIVCRDKEEKFQ
ALCNIYGTVSIGQAIILYFAIPGRLHLVTDFDGHECSSNDNQRPCHQMSFSVLITTNVCA
RGIDVEQVTVVINFDLPVNQHGDADCETYLHRIGRTGRFGKPGLAINMVDGNRSLNVLKN
IESHFGRKIKKMDANEIEDLEEIGKDRL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagtttttctaagtatgtctttgtctttgcatatgttagaatttacagaaatc
tatattttgacatttacattttcgataggctttatcatggcagatgttgatgattggggt
ctttcttctgatatacaagagaaaggaatttcgaaattagttgacaatttaaatttggac
gatcctattccaccacctgtgccacctccaatacctcctccaaagattcctgatgaagca
tcaaaagacgatgatgaaaaagatgatgaacctgaattaaatcctgctgagatatctgtg
atgaaaaaacttgtaagatctcatttaattgaagtttctcatgatatagatatccagaga
aatcctaattcatctctttattctgtgaaatcttttgaagaattgaatctgcgacctgaa
cttcttaaaggtgtgtgtggtatgggatttaattcaccctcaaaaatacaagagactgct
cttcctactcttattgcagatcctccacaaaatatgattgctcagtctcagagtggtacg
cttaaaactgctgcttttcttttggcaagtttgagcagagtggacacaaatttgaaatat
cctcacatgcttattttgtccccaacatatgagttagccatgcagacaggaaaagtggca
aaacaaatggcaaaattttgtcctaacattgaattttgttttgctgttagaggtgaggtt
ttgcaaagaggagaaaaaattactgctcagtttatgattggaactcctggtaaagtttat
gattgggcaatgcgctataagtgttttgatctcaggaaaataaaagtatttgttttagat
gaagcagatgttatgatctcgactcaaggatatcaagaccagtctattcgcatccataag
cagctaccgaaagattgtcagatgatgctgttctcagctacttattctgaagaaatcatg
caatttgcagaattgattgtttctgatcctattataattaaactgaaaagggaagaagac
agtttggataatatatatcagtattacatagtgtgcagagataaagaagagaaatttcaa
gctttgtgtaacatatatggtactgtgtcaataggacaggctattatattatattttgcc
ataccaggaagactgcatcttgttactgattttgacggccatgaatgttcttcaaatgat
aaccaaagaccttgccaccagatgtcattttctgttttaattactacaaatgtatgtgcc
cgtggtattgatgttgaacaagttactgttgtcatcaattttgatttgcctgtgaatcaa
catggagatgcagattgtgaaacgtaccttcatcggatagggcgaactggacgttttgga
aaacctggacttgccataaacatggttgatggaaataggtcattaaatgtattaaaaaac
attgaatctcattttggaagaaaaattaaaaaaatggatgcaaatgagatagaagattta
gaagaaataggaaaagatagattgtga
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