Stegodyphus dumicola: 118187036
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Entry
118187036 CDS
T07385
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118187036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdm03019
]
118187036
Messenger RNA biogenesis [BR:
sdm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118187036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
118187036
NCBI-ProteinID:
XP_035213110
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MAADIAVDDDDAWLYGENNAEEQRKEEINAIFDRASEEVVVPGEENIITTNGDIKHGGIE
DEVSINNQDATKVQENEEEKDSDEEEDSDDDDVQITIGDIKPASTTYPYGGAPVNLNIKR
GGAFTSGSAVSGVSKTKGIDLETVGIINGVSMYEFNLDTIEDKPWRKPGADITDYFNYGF
NEDTWKAYCEKQRKLRVDNNVTPKPVQIIPGKDQQIPIATVNENSKYSGMGAVVKKAGPP
PGRRMSGSIDVICGANSSRRSGNSKENVIQVIGRDVYDSSMPPGLPPTHIPPPFIPPNLS
VPPPGLPPGLPPPSIPPPPGTMPGHVPFPDLYGNPIFSQPPPPVPGVNVDSNSQYDEQFF
TGNSSRQFDANSESQHSWTNSPHRERDRDRDRDRDRDRDRDRDRNRERSRDKERDHYWEE
RNRERSSGRIPTSDEDYKRREREEYERRRYREYRDSRRDKERYERDYDRDYEREHYERDR
ERDSRERERRHRDHKDREERHKERSSRRRHHHDDDDEHHSSRHKHKKSKREKDDSSNAIL
EGSESTQPENEEEK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgatatagctgtggacgatgatgatgcatggttatatggagaaaataacgcg
gaagagcagcgcaaggaagaaataaatgctatatttgatagggcatcagaagaagttgtt
gttcctggtgaagaaaatattataacaacaaatggtgatatcaaacatggaggtattgaa
gatgaagtttctattaataatcaagatgcaaccaaggttcaagagaatgaagaagaaaaa
gattctgatgaagaggaagattcagatgatgatgatgttcagataacaattggtgatata
aaaccagcatctactacttatccatatggtggagcccctgtaaatttgaatatcaaaagg
ggaggagcattcaccagtggttcagcagttagtggtgtatctaaaacgaaaggaattgat
ttagaaacagtcggtatcatcaatggagtatcaatgtatgaattcaacttggatactatt
gaggataaaccatggagaaaaccaggagctgatattacagattattttaattatggtttt
aatgaagatacatggaaagcctattgtgaaaagcaacgcaaattacgtgtagacaataat
gtgacaccaaagcctgtacaaataatacctggaaaagatcaacaaattccaatagcaact
gtaaatgagaatagtaaatattctggaatgggagctgttgtcaaaaaagctggacctcct
cctggcagacgtatgtctgggagcattgatgtcatctgcggtgctaatagttctagacgt
tctggaaatagtaaagaaaatgttattcaggtgattggcagagatgtgtatgacagctca
atgccaccaggactaccaccaacacatataccacccccattcattcctcctaatttatca
gttcctcctcctggattaccacccggattgccaccaccaagcattcctccaccacctgga
acaatgccaggtcatgttccatttccagatctctatggaaatcccatattttcacagcct
ccaccacctgtaccaggtgttaatgtagactctaattcacaatatgatgaacagtttttc
actggcaattcttctcggcagtttgatgccaattctgaatcacagcacagttggactaac
tctccacatcgtgaaagagacagagatcgcgatcgagatagagacagggacagagatcgt
gatagagataggaacagagaacgatctcgagataaagaaagagatcattattgggaagaa
agaaacagagagcgttcttctggtcgaataccaacttcagatgaagattataagcgacgt
gaaagagaagaatatgaaaggaggcgttatagggaatatagagatagtcgaagagacaaa
gaacgttatgaaagagattatgatagggattatgaacgtgagcattatgagagagatcgt
gaacgtgatagtcgcgaacgcgaaagaagacatcgtgatcacaaagacagagaagagcgc
cacaaagagaggtcatcccgtcgtcgtcatcatcatgatgacgatgatgaacatcattca
tcacgtcataagcataaaaaatctaaacgtgagaaagatgactcatcaaatgccatcttg
gaaggatcagagtctacacaacctgaaaatgaagaagaaaagtaa
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