Stegodyphus dumicola: 118190119 Help Entry 118190119         CDS       T07385                                  Name (RefSeq) collagen alpha-1(XI) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism sdm  Stegodyphus dumicola Pathway sdm04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sdm00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     118190119  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sdm00536]     118190119 Glycosaminoglycan binding proteins [BR:sdm00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118190119 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 TUTF7_u4 Laminin_G_1 Motif Other DBs NCBI-GeneID:  118190119 NCBI-ProteinID:  XP_035216699 LinkDB All DBs Position Unknown AA seq 1560 aa AA seqDB search MEKSVLPKRTSFYSLFLFFYFWVLYHHSAAQLPSGSADLLRAVSIEHGLVGVSQTTGICD NRALRLDEDGNPVYGAPDVAFSIAQTAVLTVTTSQLFTGTFPYDFSVLATIRPKQGIEAF LFTIYNNIGQEEMAVGVGENVTFMCRHSAEFTALAQVSFPVAVNDGKWHRIALSIKGNSV TLLNECGQQLTESLNRTESSFIDAAGIMLLGQQLVDGVYYEGDIQQLQIVPTPEAAYEQC IDYVPDCDSPLPYATGPEDTVFPVFPNPGLPDLPLSGEDDDDDEFPDYTYPEQTPGIFTN YTFTYTPPVESNPVDENTGYHYYNVQGLPGPRGYQGPPGPPGVKGEKGDQGRDGLNGLDG AVGPPGHIFMIPYQPQGDNKGPDNTEPLRQMLSQHMLAMRGAPGPVGLSGLSGPVGPPGF QGPKGEPGEAGEEGPRGLRGMMGHPGRPGRRGPGGRDGDRGPHGPIGAKGDVGLPGMPGL PGEKGDRGFTGQQGEPGMIGHDGPQGEEGQPGPPGLPGDMGPRGFIGPRGFPGLPGPPGI PGSEGSPGAKGKEGPPGQPGQPGQSGAAGPMGPPGPQGPLGPQGLAGPRGKPGLPGLAGA DGLPGPSGEPGIPGAKGDTGGPGPQGPMGFPGQRGVKGDQGVRGPAGEKGEKGSRGLDGQ KGDYGPKGDQGIPGPDGTPGIEGPEGPKGFEGPRGEMGPPGPTGEKGKIGIPGFPGYPGH PGAKGEKGFWGKPGKKGEKGERGHQGLPGDRGPQGPRGNRGVRGRQGKTGQPGEKGSTGE PGSPGPQGERGPQGVQGQRGFAGPPGPPGARGKDGNPGMPGERGPPGEPGPPGPPGPPGV VGPQGPAGEPGPSGDIGPSGIPGVPGEPGLPGPAGKEGPPGPPGPVGEKGPAGTVGPPGF PGDRGLPGPAGPPGSKGDVGLPGAPGPSGEKGAMGLPGDPGPPGDKGRDGPPGPPGPSGP KGDKGDAGLPGLMGRDGTPGNRGLPGPPGPAGPAGEDGDKGDTGPPGQKGLKGAKGDIGP VGSPGPQGLRGDPGPAGPEGERGMTGPQGSRGPKGEDGPTGPPGPPGPAGLQGLPGPRGP KGDRGDHGKVGPPGPAGQPGEPGPPGSKGGEGIAGPPGPEGKQGPKGEDGLPGPPGPTGK DGEHGPRGPPGPKGEDGKMGLQGPPGPRGPPGPAGPKGLPGNPGFPGPAGEPGVPGPKGA TGKDGNDGSPGNPGPPGPPGESGKMGVPGTAGKPGPPGPAGKQGDVGLPGEKGDRGSAGP PGDQGPVGPTGTSGLPGPPGLRGSPGPAGDVGLPGAAGPPGQPGNIGPQGDKGAKGERGK RGLKGHRGQMGRSGMKGSQGEKGERGEKGVQGPPGMKGDPGPPGMEGQKGNDGPPGQPGL EGPPGPKGAQGPTGPKGDAGPSGPPGPPGPPGEGPQIPPEILFQRDYPYIRQKRSTDRKA YQSYTAEKEIEIEKAEENSINEQKSENSQGKPESLQDKLLNMYANIYIMRKEIDVIKKPL GTRKNPARTCRDLYLGHPDFLDGWYWIDPNLGMADDAIHVFCNMTARGQTCVFPDKHTAM NT seq 4680 nt NT seq  +upstreamnt  +downstreamnt atggagaaaagtgtgttgcctaagcggactagtttttattcattatttttatttttttac ttttgggtattgtatcatcattccgcagctcaacttccttcaggttctgcagatctcttg agggccgttagcatagaacatggacttgtaggagttagtcagacgacaggaatctgcgat aacagggcacttaggttagacgaagatggtaaccccgtttacggtgcaccggacgttgct ttcagcattgctcaaactgctgtgctgactgtcactacctcgcagctctttacaggtact tttccttatgacttctccgttttggcaactattcgaccgaaacaaggtattgaagcattc ctcttcactatttataataatatcgggcaagaagaaatggccgtcggtgttggtgagaac gtcactttcatgtgtcgtcattcagcggaatttactgcattagcgcaagtttcctttccg gttgcagtgaacgatggcaaatggcacagaattgctctgagtatcaagggaaattcagtc acattgttaaatgaatgcggccaacaactaacagaatcgctcaatcgaacggaaagttcc ttcattgacgctgcagggattatgttgctcggacagcagttagttgacggtgtgtattac gagggtgatattcaacaactgcaaatagtacctactccagaagctgcatatgaacagtgc atagactacgttcctgactgtgactctccacttccttatgctactgggccagaggataca gtatttcccgttttcccaaatcccggattacctgacttgccgctttcaggtgaagatgat gatgatgatgaatttcctgactatacgtatcctgaacaaactcctggaatctttacaaac tatacattcacgtatacccctcccgttgagagtaatcccgtggatgaaaacactggatat cattattacaacgttcagggtttacctggccctcgaggttatcaaggaccgcctggtcct ccaggagtcaaaggcgagaagggagaccagggtcgtgatggattaaatggattagatggt gctgtcggcccccctggtcacatatttatgattccatatcagcctcaaggagacaataaa ggaccagataataccgaaccattaaggcaaatgttgagccagcacatgttggcgatgcga ggagctccaggacctgtcggattaagtggtctctcaggacctgtgggaccaccaggattt cagggtccaaaaggagaaccaggcgaagccggagaagaaggaccgaggggtctccgagga atgatgggacatccaggtagacctggtcgaaggggtcctggcggaagagatggagataga ggcccgcatggtccaattggagcaaagggagatgttggtttgcctggaatgcctggacta cccggagaaaaaggagataggggttttacgggacagcaaggtgaacctgggatgataggg catgatggaccacagggagaagaaggtcaaccaggacctccaggattgccaggagatatg ggacctagaggtttcatcggacctagaggctttccaggattgccaggaccaccgggcata cctggttctgaagggtcaccaggcgctaaagggaaagagggtccacctgggcaaccggga caaccaggacaaagcggtgcagctggtcctatggggccaccaggaccacaagggccactt ggacctcaaggactcgcgggacctagaggaaaaccaggactacctggcctggctggtgca gatgggcttccgggaccatcaggggagcctgggattccaggagccaaaggagatactggt ggacctgggcctcaaggacctatgggatttcctggtcaaagaggagtgaagggtgatcaa ggtgtaagaggacccgcaggcgaaaaaggcgaaaagggatcaaggggtctggatgggcaa aaaggtgattatggtcctaaaggagatcaaggaattcctggtccagacggcacgcctggt atagaaggacctgaaggaccgaagggattcgaaggtccgagaggcgaaatgggacctcct ggcccaacgggtgagaagggtaaaataggaatcccaggattcccaggttatcctggtcac cctggagcaaaaggtgaaaaaggattttggggcaaaccggggaagaaaggtgaaaaaggt gaaagaggtcatcaaggacttcctggagataggggccctcaaggaccaagaggtaatcgt ggagtgcgcggaagacaaggcaaaactggacagcctggtgagaaaggtagtaccggagaa cctggttcaccaggaccacaaggtgaaagaggaccccaaggagtacaaggacaaagaggt tttgctggtccaccagggccaccgggagcaagaggaaaagatggtaatcccggaatgcca ggagaaagaggccctcctggtgaacccgggccacctggaccaccaggacctccaggcgtt gttggaccccagggaccagctggggaacctggaccatcaggagatataggaccttccggt attcctggtgtacccggcgaacccggattacctggacctgctggcaaagaaggacctcct ggtcctccaggtccagtaggagaaaaggggccagctggtactgtaggaccacctggattt cctggagacagaggattaccgggacctgccggtccaccaggatcaaaaggcgatgtagga ttacccggagctccagggccatcgggagagaaaggtgctatgggattaccaggtgatcca ggcccaccaggtgataagggacgcgatggaccaccagggccaccaggaccatcaggtcct aaaggagataagggtgatgcaggattacctggcttgatgggaagagatggtacacctgga aacagaggtcttccgggaccaccaggaccagcaggtcctgcaggagaggatggtgacaaa ggtgatacgggcccacctggacagaagggtctaaaaggagccaaaggagatattggtccc gttggatcaccaggacctcagggattaagaggagatccaggtccagcaggtcctgaaggt gaaagaggtatgacaggtccacaaggctcaagaggtccgaagggtgaagatggaccaact ggaccaccagggccaccaggtccggctggacttcagggtcttcctggacctcgaggaccg aaaggtgatagaggggatcacggtaaagttggaccccctggtcctgctggacaacctggt gaaccaggaccaccaggctcaaagggtggagaaggtatagctggtcctccgggtccagaa ggaaaacaaggacctaaaggtgaagatggccttcctggacctcccggaccaacaggaaaa gacggagaacatggacctcgtggaccaccaggaccgaaaggagaagatggtaaaatggga ctgcaaggacctccaggaccaagaggtcctcccgggccagcagggcctaaaggtttgccc ggtaatcctggttttccagggccagcaggagaaccaggtgttcctgggccaaagggcgct actggaaaggatggaaatgatggaagccctggcaatccgggacctccaggaccacctggt gaatctggtaaaatgggagttccaggaactgctggaaaaccaggacctcctggaccagca ggaaaacaaggggacgtaggccttccgggagagaaaggagacaggggatctgcaggtcct ccaggtgatcagggacctgttggacctacgggaacttcaggattaccaggacctccagga cttagaggatctccaggacctgctggagatgtaggactaccaggagcagcgggacctcca gggcagcccggaaatattggtccgcaaggagataaaggagctaaaggagagagaggaaaa cgaggattgaagggacatcgaggtcaaatggggagatccggaatgaagggatcgcaagga gaaaaaggtgaaagaggcgagaaaggagtacaaggaccacctggaatgaaaggcgatcca ggcccacctggcatggaaggacagaaaggaaatgatggaccccctgggcaacctggtttg gaaggaccgcctggaccaaaaggagctcaaggtccaactggtcctaaaggagatgctggc ccatcgggcccacctggtcctccaggtcctccaggagaaggtccccaaataccacctgag atactatttcaaagagactatccatatattcgccaaaaaagaagtacagataggaaagcg tatcaatcatatacagctgaaaaggaaattgagatcgagaaggccgaagaaaactctata aacgagcagaagtcggaaaactctcagggtaagcctgaaagcttgcaggataaacttctc aacatgtatgcgaatatctatataatgagaaaagaaatagatgtcatcaaaaagccttta ggaacccgcaagaatccagctcggacgtgcagagatctgtaccttggtcatcctgatttc ttagatgggtggtactggattgatccaaatcttggaatggcagatgacgctatccatgta ttttgcaacatgacggcaagaggtcagacatgtgtttttcctgataaacatacggcaatg

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