Stegodyphus dumicola: 118190354
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Entry
118190354 CDS
T07385
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118190354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdm03041
]
118190354
Enzymes [BR:
sdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118190354
Spliceosome [BR:
sdm03041
]
Complex C
Other components
Step II factors
118190354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
DEAD
GIPC1_GH2
AAA_22
AAA_19
AAA_30
nSTAND3
T2SSE
AAA_16
PhoH
Flavi_DEAD
Snu56_snRNP
Motif
Other DBs
NCBI-GeneID:
118190354
NCBI-ProteinID:
XP_035216950
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MEEIRRLEYLSLVSKICTELENHLGINDKDLAEFIIDLANKNDTFDAFKKVLTENGAEFS
DSFMSNLLRIIQQMRPKSSSIIDDDEDDDCKENFQSELEKKREKYPGLAIPNDDNVRNML
DEDEKIAEEALAELEAFAPKMKSAKKESLSPDSRKSKKDKAKHKSSKRNHSEERHHKRRY
SRSRSRSRSPSYKKKKYRYSRSRSRSPRKNKSWRSSKSRSLSPRSDKKSRHPESKRSERE
KPPPLPLEPVVGQIYSGKVTNIMQFGCFVQLEGLRKRWEGLVHISQLRREGRVTSVGDVV
QKGQRVKVKVLSFTGQKTSLSMKDVDQDTGEDLNPSVAVTESSRKRDQDILRNPDRPSCL
PLISKLDDNNVDNRRHVQRISSPERWEIKQMLAANCIDKSELPDFDESTGLLPKDEDDDE
DIEIELVEDEPPFLSGHGRANMQDLSPVRIMKNPDGSLAQAAMMQSALAKERREQKQQQR
EAEMDSIPAGLNKHWIDPLPDAEGRTLAANMRGIGLSTQDLPEWKKHISGGSKASYGKKT
QMTILEQRQSLPIYKLKDDLIKAVTDNQILIVIGETGSGKTTQMTQYLSEAGFTARGKIG
CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLVDP
DLKSYAIVMLDEAHERTIHTDVLFGLLKNAVKKRPELKLIVTSATLDAVKFSQYFFEAPI
FTIPGRTYPVEILYTKEPESDYLDASLITVMQIHLTEPPGDILLFLTGQEEIDTACEILY
ERMKSLGPEVPELIILPVYSALPSEMQTRIFEPAPPGSRKVHKMLHI
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaattagaagattggagtatctttctttagtgtcaaaaatatgcacagaatta
gaaaatcatttggggattaatgacaaggatttggctgaatttataattgacctggccaac
aaaaatgatacatttgatgctttcaagaaagtgcttactgaaaatggagcagaattctca
gactcttttatgtctaatttgctacgaatcatacaacagatgaggcctaaatcttcatct
ataattgatgatgatgaagatgatgattgcaaagaaaattttcaatctgaacttgaaaag
aaaagagaaaaatatccaggtttagctattccaaacgatgataatgtcagaaatatgttg
gatgaggatgagaagattgctgaagaagctttagctgaattggaagcttttgctcccaaa
atgaaaagtgcaaagaaagaatcgttatccccagattccaggaaatcaaaaaaagacaaa
gcgaaacacaagtcatcaaaaaggaatcattctgaagaaaggcatcacaagagaaggtat
tcacggtcaaggtctcggtctagatccccatcatacaaaaagaaaaaatataggtattct
aggtctaggtcaaggtcccctaggaaaaataagagctggcgtagctctaagtcacgttct
ttgtcacctcgatctgataagaaaagtcgtcatcctgagagcaaacgatctgagcgggaa
aaaccacctccgttgccattggaaccagtagtaggacagatttacagtggaaaagtgaca
aacatcatgcagtttggttgttttgtacaattagaagggttaagaaaaaggtgggaagga
cttgtacatatatcccaactccgacgagaaggcagagtcactagtgttggtgatgtagtc
cagaaaggccaaagagtaaaagtgaaagttctgtcttttactggacagaaaacaagctta
tctatgaaggatgttgatcaagatacaggagaagatttaaatccctcagtagcagttact
gaatcttccaggaaaagggatcaggatatattaagaaaccctgatcgtccttcctgtctt
cctctaatttcgaagcttgatgacaacaatgtggacaatagaaggcatgtccagcggatt
tcttctccagaacgctgggaaataaaacagatgcttgcagccaattgcattgataagtct
gagttaccggattttgatgaatctactggattacttcccaaggatgaagatgatgatgaa
gacattgaaatagaactcgtagaggatgagccaccattcttatcaggtcatggtcgtgcc
aatatgcaagacctcagtcctgtaagaataatgaagaatcctgatggtagtttggcccag
gcagctatgatgcagtcagcacttgccaaagaaagaagagaacaaaagcagcaacaaaga
gaagcagaaatggattccattcctgctggtcttaataagcattggattgatccattgcca
gatgctgagggtagaactctggcagcaaatatgcgtggcattggactgtcaactcaagat
ttaccagaatggaagaagcatataagtgggggatctaaggcatcttatgggaagaagaca
caaatgactattcttgagcagagacaaagtcttcctatttataaactgaaagatgatctc
ataaaggctgtaacagataaccaaatactgatagtaattggtgaaactggatctgggaaa
accacccaaatgactcaatatctttcagaagctggtttcactgcgaggggtaaaattggt
tgcacacagccaagacgtgttgctgctatgtcagttgcaaaaagagttgctgaagaattt
gggtgcagattgggacaagaagttggctacacaatacgttttgaagattgcactagccct
gaaactgtcatcaaatacatgacagatggtatgttgcttagagaatgccttgtggaccca
gatctgaaaagttatgctattgtcatgttggatgaagcacatgaaaggactattcatact
gatgtgttgtttggtttattaaaaaatgctgtaaaaaaaagaccagaattgaaactcatc
gtcacttctgctactctagacgcagtcaaattttctcagtacttttttgaagcaccaatt
tttactattcctgggcgtacatatcctgtagagattttgtataccaaagaaccagaaagt
gattatttggatgcatccctaattactgtcatgcaaatacatttaacagaaccaccaggt
gatattttattgttcctgactggtcaggaagaaattgacactgcttgtgagattttgtat
gaaagaatgaaatctttggggccagaagtaccagaactcataattttgcctgtgtattcc
gctttgccaagtgagatgcaaactcgaatttttgaaccagctccacctggatcaagaaag
gtacataaaatgttacatatttaa
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