Stegodyphus dumicola: 118190380
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Entry
118190380 CDS
T07385
Name
(RefSeq) DNA mismatch repair protein Msh6-like isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118190380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdm03400
]
118190380
DNA repair and recombination proteins [BR:
sdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
118190380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
118190380
NCBI-ProteinID:
XP_035217004
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All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MSKPKTLLDFFSKSPASKPIPKTPKSQTPVSKNSASENILSSKKSLNGICNSDSQTPSRK
SEINRKSEKTTNKRHAPLGSDVDSEREAETDEEEKVTTSKTKRRRIIIASGSEDSEDEYK
PGKESSDSEGSASAVSENSDESPVKKKRKTMKKTTLLSPSLASVKSPKASPNSSSPKTLS
LNSPRSTLPVTPASGSSRKLSTNVSKQKSCEATNDDESSKSEDNLKEYLHETLDWLNDDK
IRDKSGKPKSHPDYNPRTLFVPDSFKKNLTPAMKQWWDMKSDHFDTVLFFKVGKFYELYH
MDAVVGVKELGLVFMKGDFAHSGFPEIAFGRYSECLIEKGYKVARVEQTETPQMMEERCK
SLHRPTKFDKVVAREICQITTKGTRTLTYQSEPMAANNNYLLAICEKYDEGEGGASEYGV
CFIDVTIGKFSLGQFMDDRHGSRLMTLIALYPPSEILYERSSVSKKTLQLLDNNLNRVSK
EALSSGSQFWDSTKVLKFLSASGYFKGENDVLECPETILKMLDEDDRLLQTPLKNYELAF
KSLGACIWYLKESCIEDAVLTMKLFEEFKPLDGIAVATKESNEFIKQHMVLDGVTLQNLD
IVPVHPLDTTDESLLGVMDFCSTSFGKRLFRHWLCSPLCNPRSITDRLDAIDDLMEICDT
VEVVVELLKKIPDLERFLSKIHTQGLNRSKSHPEMRAIFYESDIYNKKKLLDFLSTLDGF
KESIKVISHFEDHLENFKSSILKECTSTTKVGGRFPDLSEKLVYFDHAFDHEVAKKEGNF
IPRPGVDEEYDSACAEIEETEKDLESYLQEQKQLLNCKVTYVGSAKTRFQLEVPDNKKVP
SNFEFQGARKGFKRYYTQECKDFVTRISKAEENRKVALRDVARRIFAQFDKDYNMWKAAV
HCLSVLDVLISLLTYYKTSAVTMCRPKFSLPSEDTKPFLEIIEGRHPTLLKYFTNDAYIP
NSVYIGPKREPEKENINSGGQLVLVTGSNMGGKSTLMRQAGTLVIMAQMGSYVPAESMSL
TPVDRIFTRIGASDNMSKGESTFFVEASETSSILHHATLNSFVLVDELGRGTATYDGTAI
ACAVLDYLANTVGCRTLFSTHYHNLVEKFYSHPTVGLGHMAYMVEEDSECPALERVTFLY
KFIDGVCPKSYGFNVALLAGISKDIVHSGHLKAQEMEYCSKISKCLRKLLRNKAPEEIAI
KLHEKLKTLKILE
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacctaaaacattgttagacttcttttcaaaaagtccagcaagtaagccaatt
ccaaaaacacctaaatcacaaactcctgtgtcgaaaaattccgcttcagaaaacattctt
tcttctaagaaatctcttaacggaatatgtaattctgattcacagactccttcaagaaaa
tctgaaataaatcgaaaatctgaaaaaactacaaacaaaagacacgcgcctttaggaagt
gatgttgattctgaaagagaagcggaaactgatgaggaagaaaaagtcaccacttctaaa
actaaaagacggcgtatcataatagcatctgggtcagaagattctgaagatgaatacaaa
cctggaaaggaaagctcagatagtgaaggcagtgcatcagcggtatctgagaattcagat
gaaagtccagtgaaaaagaagagaaaaacaatgaagaagacaacattgttatcaccatct
ttggcttccgtcaagagccctaaagcttcacctaattcttcttcacctaaaactctctct
ctcaatagtcctagaagcactctaccagtaacacctgcatctgggagttcaagaaaactt
tctactaatgtgtctaaacagaaatcttgtgaagctacaaatgatgacgaatccagtaaa
agtgaagataatttaaaggaatacctacatgaaactttagattggttaaatgatgataag
ataagggacaaatctggtaagccaaagtcacatccagactacaatcctcggacattgttt
gttcctgatagctttaagaaaaatttaactcctgcaatgaagcaatggtgggatatgaaa
tcggaccattttgatactgtccttttcttcaaggttggaaaattttatgaattgtaccac
atggatgctgttgtaggagtcaaggaactaggattagtctttatgaagggtgactttgct
cattctggttttccagaaattgcatttggtagatattctgaatgcttaattgaaaagggg
tacaaagtagcaagagtggaacaaactgaaacacctcaaatgatggaagaacgttgcaaa
agtttgcaccgaccaacaaaatttgataaagtggtggctcgtgaaatttgtcagataaca
actaaaggcactagaactctgacatatcagagtgaacctatggcagctaataataattat
ttgttagctatatgtgaaaagtatgatgaaggagaaggtggtgcatctgaatatggtgtt
tgttttattgatgttacaataggaaagttttcattaggtcagtttatggatgataggcat
ggttcaagacttatgactttgattgcactataccctccatctgagattttatatgaacga
tcttctgtatccaagaagactctgcagttgctggacaacaatttaaatagagtttcaaag
gaagctctaagttctggctctcaattttgggattctacaaaagtattaaaattcttgtct
gcaagtggctattttaaaggtgaaaatgatgtattggaatgccctgaaacaatcttaaaa
atgcttgatgaagatgaccgattattacagactcctttaaagaattatgaacttgctttc
aagtcacttggtgcctgcatctggtatttaaaagaaagttgcattgaagatgctgtcctt
actatgaaattgtttgaagaatttaaaccattggatggtattgcagtagcgactaaagaa
tcaaatgaatttataaagcagcatatggttttggatggagtaacattgcagaatttggat
attgttcctgttcatccattagatactacagatgaatcattgttaggtgtaatggatttt
tgctcaactagttttggcaaaaggctttttagacattggctttgttcaccattgtgtaat
ccaagaagtataactgatcgtctagatgctattgatgaccttatggaaatctgtgatact
gttgaagtagtagttgaattgttaaaaaagataccagacttggaaaggtttttaagcaaa
attcatactcaaggcctgaatcgttccaaaagtcatcctgaaatgcgggctattttttat
gaatctgatatttacaataagaaaaagttgcttgactttttatcaacacttgatggattt
aaagaaagcataaaagtaatatctcattttgaagaccacttagaaaacttcaagtcatct
attttgaaggaatgtacttccactactaaagtaggaggtcgtttcccagatttatctgaa
aagttagtatattttgaccatgcatttgaccacgaagtagctaaaaaagaaggtaacttt
attccacgtcctggagttgatgaggaatatgattctgcgtgtgcagaaattgaagaaacg
gaaaaggatcttgaatcctacctacaagagcaaaaacaattactgaattgcaaggtaacc
tatgttggcagtgcaaagacaagatttcaacttgaagttcctgataataaaaaggttcca
agtaattttgagtttcaaggagccagaaaaggatttaagaggtattatactcaggaatgc
aaagattttgtaactcgcataagtaaagcagaggagaatcggaaagtagcattacgtgat
gttgcaagaagaatttttgcacagtttgataaagattataatatgtggaaagctgctgtt
cattgtctttctgtacttgatgttcttatcagcttgttaacatactacaaaacaagtgca
gtaactatgtgcagacctaaattttcacttcctagtgaagatacaaagccatttttagaa
atcattgaaggaagacatccaacattattgaaatattttacgaatgatgcatacattcct
aatagtgtttatattggacctaaaagggaacctgaaaaagaaaatattaacagtggagga
caattagtattggtcactggctcaaacatgggtggcaaatccactttaatgaggcaagct
ggaactcttgtgataatggctcaaatgggttcctacgttcctgctgaatctatgtcttta
actccagttgatcgaatatttactagaattggtgctagtgataatatgagtaaaggagaa
agtacattttttgtagaggcaagtgagacttcaagcatcctacaccatgccacactcaat
tcctttgttttagttgatgaactaggtagaggaactgctacttatgatggtacagccatt
gcatgtgctgttttagattacctagctaacactgttggttgtagaactttattttctact
cattaccataatttagttgaaaagttttattctcatccaacggttggtcttggtcacatg
gcatacatggttgaagaagatagtgaatgtccagcattggaacgtgttacctttctatat
aaatttattgatggtgtatgtccaaaaagttatggcttcaatgtagctttgctggctggt
atttcaaaagatattgtacattctggccatttaaaagctcaggaaatggaatactgttca
aaaatctccaaatgcttaaggaaacttcttagaaacaaggcaccagaagaaattgccatc
aagcttcatgaaaagcttaaaactttgaaaattctggaatga
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