Stegodyphus dumicola: 118190705
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Entry
118190705 CDS
T07385
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118190705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdm03019
]
118190705
Messenger RNA biogenesis [BR:
sdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118190705
mRNA degradation factors
5'-3' decay
Decapping complex
118190705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
VWA_4
DUF7391
STAT_linker
Motif
Other DBs
NCBI-GeneID:
118190705
NCBI-ProteinID:
XP_035217353
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MADNFFGFDTEFPSGTNVLGRQVVQDVLLTGDVEEEYDALNDETFGQAANDDWEEAHEKL
SELIKKNKLVPHSVFNDTLLENDESQDEIVSKSISQLGLEDDLDDPAIMTVARNCHLSSR
LGSVFGPSPPPPAILETEICGSPKTRSIWSTTPKDSGISSILQSLSSSSSLSHLDSSTAL
NSSSDSVFSIPCKAWRAEELERNLLASSNPERVQAPPGSKWPQVSQLNSVNHQNFTNHVV
TSSQFPTLNQNQNKSNKDRMLTREEVERHMHSDRRLNFPPNVFNHLGLNSPLMRPNMMSP
IGTANSNGLGGVSDSHLRSLKRPMLENVKVDAPFLQYPIPRMGQLPLRGPPLPNLSPRFT
PPNVNLTATTLHNFPRAVPHPLMYKYPAVVNGRYPNNVRLLPWQDDESQHIIASYNKYGD
GSHAVDNQTEDEYAGLMTQKEKEWLVKIQMLLLKFENPYVEDYYYTTQLTRKCKKKYSET
ATKGGGDAPELILPETTKHESKTYVPTQFEGSLGKLQAVSVNFPRRVLDIKVARPLEDDE
GRVVTNQSLMRYRRLLLDIEKLYSHLLDIEDEERRILAKPDNESEPHRKTIEKLTKNIFN
GLFCDNSTGDSFSSIAMIRKGRSLIMRAFKIFNKEQQLHCLIALFRYLPLVLKKDQNDHV
LEQHCKMICDTIQELSISDMVLIGEALKNGASSEPPSGSGKEKSNFITALKNKFGSSVIC
SLLLRAENLYSGFELFETDIEARWAKVVIHLVDCLCSVTDSSLSPPETPCSGLIVHFQRF
AVDRDKFEVLKEKLAVFEGDLKNDAELDSGV
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggctgataacttttttggtttcgatacggaatttccatcaggaacaaatgtacttggg
agacaagtagttcaagatgtattgcttactggggatgttgaggaagaatatgatgcatta
aatgatgaaacatttggccaggctgcaaatgatgactgggaagaagctcatgaaaagtta
tctgaattaataaaaaagaataaattagtaccacattcagtttttaatgacactcttctt
gaaaatgatgaaagtcaagatgaaattgtttcaaaaagcatatctcagttgggcttggaa
gatgacttagatgatcctgctatcatgacagttgctcggaattgccatttatcgtcccgt
ctaggctcagtttttggtccttctcctcctccccctgctattttagagacagaaatttgt
ggctctccgaaaactcgttctatatggagcacaacacctaaagatagtggaatttcatca
attttgcagtcacttagtagttctagtagcctttctcatttggattcatccacagcactg
aattcaagcagtgatagtgttttttctattccctgtaaagcatggcgagcagaagagttg
gaaaggaatttattagcatcttcaaatccagagcgtgttcaagcacctcctggcagtaaa
tggcctcaagtctctcagttaaatagtgttaatcatcagaactttaccaatcatgttgta
acatcgtcacagtttcctactttgaaccagaaccaaaacaaaagtaataaagatagaatg
ttgacgagggaggaagttgagaggcatatgcattctgatcgaaggcttaatttccctcca
aacgtgtttaatcatcttggacttaattcacctctaatgcggccaaatatgatgtctcct
ataggaactgctaatagtaatggtttaggtggagtttcagattctcatcttagatctttg
aaaaggccaatgcttgagaatgttaaagttgacgcaccattcctgcagtatccaattccc
agaatgggtcaactgccattaaggggtcctccattgccaaatctatcaccgagatttact
cctccaaatgtaaatttaactgcaacgacgcttcataattttccaagagctgttccacat
cctctcatgtataaatatcctgccgttgtaaatggaagatatcctaataatgtaagatta
ttaccatggcaagatgatgagagccagcatatcattgcatcgtataataaatacggtgat
ggttctcatgctgttgataatcaaacggaagatgaatatgctggattgatgactcaaaaa
gagaaagaatggcttgtgaaaatccaaatgttactcttaaaatttgaaaatccttatgta
gaagattattattacactacacagttaacaaggaagtgtaagaaaaaatattctgaaact
gcaacaaaaggtgggggtgatgctccagaactcattctgcctgaaacaactaagcatgaa
agcaaaacatatgttcccactcaatttgagggatctttgggaaagctccaggctgttagt
gtgaactttccgagaagagtattggatataaaagttgctcgtcctctggaagatgatgaa
gggagagtcgttaccaatcagagtcttatgaggtatcgacgcctgttgttggacattgaa
aagctttatagccatcttttggacattgaagatgaagaaaggagaatccttgctaaacca
gataatgagagcgaaccacataggaagaccatagaaaaattaaccaaaaacatatttaat
ggcttattttgtgataactctacaggtgatagtttttcaagcattgctatgatacgtaaa
ggtcgatccttaatcatgagagcttttaaaatatttaacaaggaacaacaacttcattgt
ttgattgccctgtttcgatatttgccactggttttaaagaaagatcagaatgatcatgta
ttagaacagcactgcaaaatgatatgtgatactatccaagaactatcaatatcagatatg
gtacttattggtgaagccttaaaaaatggtgcatcctcagaaccaccttctggtagtggt
aaagagaagagcaattttataactgcattaaaaaataagtttgggtcatctgtgatttgc
agcttgttattgagagcagaaaatttgtattcaggatttgaactatttgaaacagatatt
gaagccagatgggcaaaagttgtgatacatttagtggactgcctttgcagtgttacagat
tcttcattatcacctccagaaactccgtgcagtggtttgatagtgcattttcagaggttt
gctgtagacagagataaatttgaagtacttaaagaaaaattagcagttttcgagggagat
ttaaaaaatgacgcagaattggactcaggtgtttga
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