Stegodyphus dumicola: 118191101
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Entry
118191101 CDS
T07385
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sdm
Stegodyphus dumicola
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdm03016
]
118191101
Enzymes [BR:
sdm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
118191101
Transfer RNA biogenesis [BR:
sdm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
118191101
Prokaryotic type
118191101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF3386
DUF2205
Motif
Other DBs
NCBI-GeneID:
118191101
NCBI-ProteinID:
XP_035217784
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MENVGWIFVLFSEKWRTSKRVDAVVKMIFCDLLLPRSCLKRSRTELIRMSSECAGDSVKR
KVDEISDCSESVSKKPLISDEKPLDDIIVKALGDTNRVRKPKKVVFLLCYLGKEFYGMQR
NSNVSTVEEELFKALLETNVILKSEFDFPKTMKFQRAARTDKGVSAVRQIVSLKIPLKEI
SDALPEKINKHLPPEIRLVAVRRVTQSFDAKIACDARTYSYMLPTFAFAPNIEGNSEEYR
IDDEKIKEVNKFLQNYIGTHNFYNFTSGRLPGDPSCKRYILSCECGPPFESCGLELSVIK
IKGQSFMLHQIRKMVGLTIAFMRNLADDSILEKIWLKERIDIPKAPGLGLMLEELHYDWY
DSKYGSDGMHEPLKWDAYNEFIETFKQEKICANIAKTEREEKSMLQWLETLPHHSYDVRD
AGPPEKLPPKGPIEATISDDLHQQQSILKAVSNSSVSASDIDENLCSDEVNSNTTSSELS
TNICKKETEIKCEC
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgtcggatggatatttgtgcttttctccgagaaatggagaacatctaagaga
gttgatgcagttgttaagatgattttttgtgatttgttactaccaagaagctgtttgaaa
aggagtcgcaccgaattgatcagaatgagttccgaatgtgctggagattctgtaaaaaga
aaagtagatgagatttctgactgttctgagtctgtgtcaaagaaaccacttatatcagat
gagaaacctttggatgatatcattgtaaaagctttgggtgatacaaatcgtgtaaggaaa
ccaaaaaaggtagtttttctgttgtgttacttgggcaaagaattttatggaatgcaaagg
aattcaaatgtttctactgttgaagaggaattatttaaagccttactggaaaccaatgta
attcttaaatcagaatttgattttcctaaaacaatgaaattccaacgggcagcacgaact
gacaaaggcgtatctgcagtaagacagatagtttctctaaaaattccattgaaagaaata
tctgatgcccttcctgaaaaaattaataagcatcttcctcctgaaatacggcttgttgct
gtaaggagagttacccaatcgtttgatgcaaaaattgcatgcgatgcaagaacttattct
tatatgttgccaacatttgcatttgctcctaatatagaaggaaactctgaagaatatagg
attgatgatgaaaaaattaaagaagtaaataaattcttacagaattacataggaacacat
aatttttataattttacgtctggaagattacctggtgatcccagttgcaaaagatatatt
ttatcatgtgagtgtggccctccatttgaatcctgtggtctagaactttcagtgataaaa
atcaaaggacagagctttatgcttcatcaaataagaaagatggtaggacttactatagca
ttcatgcgcaatttggctgatgacagtattttagaaaaaatttggcttaaggaacggatt
gacattccaaaggcacctggattaggtctaatgttagaagagttacattatgactggtat
gattcaaagtatggatctgatggcatgcatgaaccattaaaatgggatgcatacaatgaa
ttcattgagacatttaaacaagaaaaaatatgtgcgaatattgcaaaaacagagagagaa
gaaaaatctatgctgcagtggcttgaaactttaccacatcatagttatgatgttagagat
gcaggccctccagaaaagctcccacccaaaggacccatagaagcaactatcagtgatgac
ttacaccagcaacaatctatccttaaagcagtgtcaaattccagtgtttctgcctctgat
atagatgaaaacctttgtagtgatgaggttaactctaatacaacatctagtgaattaagc
acaaatatttgtaaaaaagaaacagaaattaaatgtgaatgttaa
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