Stegodyphus dumicola: 118192521
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Entry
118192521 CDS
T07385
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
sdm
Stegodyphus dumicola
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdm03041
]
118192521
03016 Transfer RNA biogenesis [BR:
sdm03016
]
118192521
Enzymes [BR:
sdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118192521
Spliceosome [BR:
sdm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118192521
Transfer RNA biogenesis [BR:
sdm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
118192521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
118192521
NCBI-ProteinID:
XP_035219408
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MTAFEEMGVLPEIAQAVEEMDWNLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLSDQLSGKSKKSDTGGGSAQSSKWRMSYFDRGSALAVSPDGKMCQSREPKEWH
GCRATKGVQGKGKYYYEAKVTDEGLCRVGWSTPAASLDLGTDKQGFGFGGTGKKSFGKQF
DSYGEPFGMHDVIGCFLNLDNMIIKFSKNGVDLGDAFKIPDNLRRSAFFPAVVLKNAEME
FNFGETSFKYPPEDGYVAICSASKECTVNSTVTGESSGPVKNIKNAPQAIIIEPSRELAK
QTLKCIQNFKKHLHSPNVKELLIIGGVSAKEQIMELQSGIDIVVGTPGRLEDLISTGQLS
LSQVQFFVLDEADGLLSAGYGDLINRIHQQIPKITPDGKRLQMVVCSATLHSFDVKKLAE
RLMHFPTWVDLKGEDSVPETVHHVVCMVDPRTDTSWRNLKRPIKTDEVHAKDNTRFGSNT
PEMLSEAVKLLKGEYVITAINEHKMDKGIIFCRTKIDCDNMENHLNALGGGPRNRNNPYS
CVCLHGDRKPAERKENLEKFKRGEVKFLICTDVAARGIDVTGVPYVINMTLPDEKNNYVH
RIGRVGRAERMGLAISLVSAVPEKVWYHSNCSSRGKNCWNTRLTDQGGCCIWYNEPQYLA
DIEEHLNCTIQQVDPDLKVPCDEFDGKVVYGQKKAQMGSNYQTHTAQMAPTVEILAELEM
VAQKYFIKRYCMKDKSFLK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttttgaagaaatgggtgttcttcctgaaattgctcaggcagttgaagaaatg
gattggaacttgccgactgatgttcaggcagaagccatacctctaatcctaggaggtggt
gatgttctcatggcagcagaaactggcagtgggaaaacaggagcattttgcttgccaatc
ttacaaattgtttgggaaacactgagtgaccaattaagtggaaaatcaaaaaagtctgac
actggaggaggttctgcacagtcatctaaatggagaatgagctattttgaccgaggaagt
gctttagctgtcagtcctgatggtaaaatgtgccaatcaagagaacctaaggaatggcat
ggttgtcgtgctaccaaaggggttcaggggaaaggaaagtattattatgaagctaaagtt
acagatgaaggtctttgccgagttggatggtccacacctgctgcttcccttgaccttggt
actgataaacaaggctttgggtttggtggaacagggaagaaatcctttggcaaacagttt
gactcttatggtgagccatttggaatgcatgatgttattggttgctttttgaatcttgat
aacatgattattaaattttcaaaaaatggtgtcgatttgggcgatgctttcaaaattcct
gataatttacgtagatctgcattctttcctgctgttgttttaaagaatgctgagatggaa
tttaactttggtgaaacttccttcaagtatccaccagaggatggctatgttgcaatatgc
tcagcttctaaagaatgtactgtgaattcaacagtcacaggagaatcatctggtcctgta
aaaaatattaaaaatgcacctcaagcaattattatagagccatcaagagaattagcaaaa
cagactctgaaatgtatacagaatttcaagaaacatcttcatagtcctaatgttaaggag
ctgctaatcattggaggagtatctgcaaaggaacagattatggagcttcagagtggtatt
gatattgttgttggaactcctgggcgattagaagacctcatatctacagggcagctttca
ctttctcaggttcagttttttgttctggatgaagcagatggtttgctctctgctggctat
ggtgatttgattaatcgaatccatcaacagatccccaaaataactcccgatggtaaacga
ttacagatggttgtgtgctctgccactttgcattcatttgatgttaagaagcttgcagaa
agattgatgcattttccaacttgggtagatttgaagggagaagacagtgttcctgaaact
gtgcatcatgttgtttgcatggttgatccaaggacagacacctcatggcgaaatttgaaa
agaccaattaaaactgatgaagtccatgcgaaagataatactaggtttggaagtaataca
ccagaaatgttgtctgaagcagtaaaattattgaaaggagagtatgtgattacagctata
aatgagcataaaatggataaaggcattattttttgtcggaccaaaattgactgtgataat
atggagaatcatcttaatgcactgggtggaggaccacgtaatagaaataatccctattcc
tgtgtatgtttgcatggtgatagaaagcctgctgaaagaaaagagaatcttgaaaaattc
aaaaggggggaagtgaaattcttaatatgcactgatgtagctgccagaggcattgatgtg
actggtgtgccatatgtgataaatatgacattacccgatgaaaagaataattatgtgcac
cgcattggtagagtaggtcgggctgagagaatgggccttgctatttctttagtttctgca
gttcctgagaaggtttggtaccactccaactgttcgagtcgagggaagaattgctggaat
acccgattaacagatcaggggggttgttgcatttggtataatgaacctcagtacttagcg
gatatagaagagcatttgaattgcaccattcagcaagtagatcctgatctgaaagtaccc
tgtgatgaatttgatggaaaagttgtctatgggcagaaaaaggctcaaatgggtagcaat
tatcaaacacatactgcacagatggctccaactgtagaaattcttgcagagttagaaatg
gttgctcaaaaatatttcattaaaagatactgcatgaaggacaaatctttccttaaatga
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