Stegodyphus dumicola: 118193122
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Entry
118193122 CDS
T07385
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03013
Nucleocytoplasmic transport
sdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118193122
03015 mRNA surveillance pathway
118193122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdm03019
]
118193122
Messenger RNA biogenesis [BR:
sdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118193122
mRNA cycle factors
P-body specific factors
118193122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
118193122
NCBI-ProteinID:
XP_035220052
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MSERKSELRGKSWKREREERGRRQLAQRDRYVSSTNNETDEFREGNPEERTTEVADELLN
NSESLVDPNVKNFTKDTKTVSKEAQGSEEENFKNEQCTADDKISSVNTEAENAISAEDEK
KELMLFINEVSEKLKLKAELRSINANADANRPEESFFSKLDSSLKKNTAFIKRLRNMTDA
QKDSLIKDMNMLNLTKYISEAAAAIVDAKLKMSDVNTAVQICSILHQRYSEFSAQLLEHW
QKVLPMKKDEKISNPSKIRVDLRFYAELVSSGVFSLREGLPLLGNLLTVLTASDKEEHGN
VNILLSFCRHCGEDYAGLAPRKYRILSEKFGVEIPKSDFLPADRQKGLRNLLKEYYKSLC
KHLIRDYKVLQNMEKQNHRILQTKGELSVERKEKFEATQTAFQKLLSNTQQFADIVDEDV
PDLPKDESFPQDNESTTLDVHNRFKDGDADGSLSIWEDDDTRCFYENLPDLKAFIPGILF
KDSSQVPLQNQNDSAEEKLEEDLSKLEIEDAELLEVEAEELKDSGKIDDKDLTETLMQEI
EDTEEESAVSNTANKLLLDGFLTSLLNCVNREIIDQAAVDFCMNLNTRPNRKKLVRSLFL
VPRTRLDLLPFYARFVATLNPCMPDIAADLVAMLKQDFKFHIKKKDQINIESKVKTVRFI
GELVKFKVFPKSEALFCLKLLLSDFIHHHIEMACNLLETCGRFLFRAPDSHQRTKVLLEQ
MMRKKSVMPLDSRYTTMIENAFYYCNPPEVAPIVKVERPPMHEYIRKLLYRDLAKNSTDK
SSEKYSSSAKVLRQMRKLDWDDTETAAYITKCLTAVWNVKYYNIRCVANLLAGLVAYQEN
VGSQVVDGVLEDIRLGMEVNHPKYNQRRVSMVRYLGELYNYRMVESTVIFRVLYSFITFG
VNYDGTYSELDPPEHLFRIRLVCILLDTCGQYFNSGSSKKKLDCFLVFFQRYYWHKMSSE
IYTEEFPFPVTVKFMVADTIALLRPKLKLFESLEEAIQGVQDLIKELKPKLAEVCPNLLT
DDDEDVEKSKPQSPTKDDALGPIEEVDEEMDEDGQSETSYQEGETEGDTDGFSGSQSQPF
EDENEVNSRHGMSQSDVDNDPVYDANEDAPVVKPVTKQVQCAEDEDFMTAFDKMLSESIL
HRNQESVKPQVDIVIPMTIKGANAKKTMSALELKEEEKPTINFVLMTRRGNKQQVSV
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagagaaagagtgaattgcgaggtaaaagctggaaacgtgaaagagaagaacgt
ggtcgtcgacagttggcacaacgagatcgttatgtaagtagcacaaataatgaaactgat
gaatttcgagaaggaaatccagaagagcgtaccactgaagttgctgacgaactcttgaat
aattctgaatcattagtggatccaaatgtgaaaaattttaccaaagatacaaaaactgtt
tcaaaagaagcacagggttctgaagaagaaaattttaaaaatgaacagtgtacagcagat
gataaaatttcatctgttaatactgaagcagaaaatgctattagtgctgaagatgaaaag
aaagaattgatgctttttattaatgaagtttctgaaaaactgaaactgaaagctgagcta
agaagcataaatgcaaatgctgatgctaacagaccagaggaatcgttcttcagcaaatta
gattctagtcttaaaaaaaatactgcttttataaaacgactgagaaatatgacagatgca
cagaaagactccttaattaaggatatgaatatgttgaatttgacaaaatatataagtgaa
gctgctgcagccatagttgatgccaaattaaaaatgtccgacgtaaatacagctgtacaa
atatgctctattcttcatcagcgatactcagaattttctgctcagcttcttgaacactgg
cagaaagtccttccaatgaaaaaagatgaaaagatttcaaatcccagtaaaattcgagtc
gatcttaggttttatgcagagcttgtgtcatctggggtattcagtttgagagaaggcttg
ccattacttggaaatctattaactgttttaactgcttctgacaaagaagaacatggcaac
gttaacatacttctcagtttctgccggcattgtggtgaagattatgctggattagctcca
aggaaataccgtatattgagtgaaaaatttggtgtagaaattcctaaaagtgatttcttg
cctgcagacaggcaaaaagggttgcgtaatttactaaaagaatattataaatcattatgt
aaacatcttattagagattacaaagtacttcagaatatggaaaaacagaaccacagaatt
cttcagacaaaaggtgaattgagtgttgaaaggaaagaaaaatttgaagcaacccaaact
gctttccagaaactgttatctaacactcaacaatttgcagatattgttgatgaagatgtg
ccagatttacctaaagatgagagctttccacaagacaatgaaagcacaacattagatgta
cataatcgtttcaaagatggagatgctgatggttctttatcaatttgggaagatgatgac
acaagatgcttttatgaaaacttgcctgatttgaaagcatttattcctggtatcctcttc
aaagatagttcccaagttcctcttcaaaatcaaaatgattcagcagaagagaaattagaa
gaagatttgagtaaattagaaattgaagatgctgaactcttggaagttgaagctgaggag
ctaaaagatagtggtaaaattgatgataaagatttaacagaaactcttatgcaagaaatt
gaagacacagaagaagagagtgctgttagtaatacagcaaataaacttcttttggatgga
tttttgacatcattattaaattgtgttaatagagaaatcatagatcaagcagctgttgat
ttctgcatgaatttaaatacgaggccaaatcgcaagaaacttgttcgatcattgttttta
gttcctagaacaagactagacctcctgccattttatgcacgatttgtagctactttaaat
ccttgtatgccagatattgctgctgatttagttgccatgttaaaacaagattttaagttt
catattaagaagaaagatcaaataaatattgaatcaaaagtcaagactgtgcgatttatt
ggagaattggtcaaatttaaagtttttcccaaatcagaagctcttttttgcttaaaactt
ctattatctgattttattcatcatcatatagaaatggcttgcaatctgcttgaaacatgt
ggcagatttctatttcgagctcctgattctcatcaacgcacaaaagtacttctggaacaa
atgatgaggaagaagtctgtcatgcctttagacagcaggtatacaacaatgatagaaaat
gctttctactactgtaatcctcctgaggttgcacctattgttaaggttgaacgtccacca
atgcatgagtacatacgaaaacttctttatagggatcttgcaaagaacagtactgataag
agttcagaaaaatattcatcttcagcgaaagtcttgcgccagatgcgaaaattagactgg
gatgatacagaaactgctgcttatattacaaaatgtcttacagcagtttggaatgtgaaa
tattataacattcgctgtgtggctaatttacttgctggcttggtagcttatcaggaaaat
gttggatcccaagttgttgatggtgttttagaagatataagattgggcatggaagtaaac
catccaaaatacaatcaacgccgtgtcagcatggttcgctatcttggagaattatataac
tatagaatggttgaatctactgtgatatttcgtgttttgtattcattcatcacttttggt
gttaattatgatggtacatactctgagttggatcctcctgaacatctttttcgcatccgc
ttagtttgcattcttttagacacttgcggccagtatttcaatagtggttccagcaaaaag
aaattagattgttttttagtgttcttccagaggtattattggcacaaaatgtcttctgaa
atctatactgaagagtttccctttcctgtcacagtgaagtttatggtagctgatactatt
gctcttttaagaccaaagctaaaactttttgagagtttagaagaagctattcaaggtgtt
caagatcttatcaaagaattaaagccaaagttagctgaagtatgtccaaatctcctaact
gatgatgatgaagatgtagaaaaatcaaaacctcaatctccaacaaaagatgatgcttta
ggacctattgaagaagttgatgaagagatggatgaagatggccaaagtgaaacaagttat
caagaaggagaaactgaaggagacacagatggctttagtggcagtcagagtcagcctttt
gaagatgaaaatgaagtgaacagtaggcatggtatgtcgcagagtgatgttgataatgat
ccagtctatgatgctaatgaagatgcacctgttgttaaaccagtcaccaaacaagttcag
tgtgcagaggatgaagattttatgactgcttttgataaaatgctatctgaaagtattttg
catcgtaatcaagaatcagtaaaaccacaagtagatatagtgattccaatgactatcaaa
ggtgcaaatgctaaaaaaacaatgtctgcattggaactaaaagaagaagaaaagcccaca
ataaattttgtacttatgaccagaagaggtaacaagcagcaggttagtgtttaa
DBGET
integrated database retrieval system
