Stegodyphus dumicola: 118193780
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Entry
118193780 CDS
T07385
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118193780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdm03021
]
118193780
Enzymes [BR:
sdm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118193780
Transcription machinery [BR:
sdm03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
118193780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
118193780
NCBI-ProteinID:
XP_035220810
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MVKEQFRESHLSKKISKISFGLQSAIEIRQQAHVCCVSMALYEGNAHEAVPYGVLDPKMG
TSRKNQKCATCGXQVSDCIGHFGYIDLKLPVFHVGFFRSTITILQTICKTCSRVLLNSNE
RKKFSEILKRPNISYLQKKTLRKQIVDLCMKKSVCPYCQAVNGQVKKAGCLKIVHDKYKK
EKRSDPVLLEYLEEFDEAMKNNKELEHCKNKLTQINLDPLKVLDLFRRIVDEDIPLLLMN
PHVGRPEHLILTKLPVPPLCIRPSVISEVKSGTTEDDMTTKLTALIQLNQEIQMHGTSAP
LKHVMKVWDNLQTHVALYINSDMSGVNMEMQLVKPSGRGIVQRLKGKHGRFRGNLSGKRV
EFTGRTVISPDPNLPIDQVGIPEHVAKILTYPEMVTKHNMKRLKALILNGGYKHPGANFY
IERNTKMKSDLNYANRRRIADNLKCGDIVERHMLDGDVVLFNRQPSLHKLSIMAHKAKIV
PTRTFRFNECVCTPYNADFDGDEMNIHLPQTEEARAEALILMGVQSNLVTPRNGDPLVAA
IQDFITGAFLLTQKDTFFTREEAQQIIASILSNEDRLMRIDLPPPALIKPYVLWTGKQIF
SLILKPNKSSKVLINFRKGPKGRTKSPYTTNEELCPNDTFVIIRNSELLAGTMSKQTLGS
GSKTTIFYILLRDYGKSYAANAMLRLARLSSYFLANRGFSIGIGDVTPGAGLLKEKEKLL
HDGYAKCEEYIQSLQKGELETLPGCNEEETLEGKIMAELSAIRERAGQICHKELHKTNSP
LIMAQCGSKGSNINISQMVACVGQQAISGHRVPDGFDQRSLPHFKRNSKTPEAKGFVQNS
FYSGLTPTEFIFHTMAGREGLVDTAVKTAETGYMQRRLIKSLEDLCLHYDSSVRNSVGEV
VQFVYGGDSLDPASMEGTNKFETQKKKVDEYCIKKDDDPPEEPVIFERALYHITAKYPCP
DELPLDPETLMFLSAEIINENFMDVHENYVSQLWKFFADQSNRLRRVREKFGTFAMSDVP
PVLRHLERVTKTQLKEFLNFCKEKYMKAMIEPGTAVGAICAQSIGEPATQMTLKTFHFAG
VASMNITQGVPRIGEIINASKVISTPVITALLDVNDDLEFARRVKGRIEKTLLGEVSDYL
EEVFLPDSCFILVKLNLERIRLLQLEVNAETILYSICTTNITEIKGIKPQNITIHKKDVL
LVKPFVSSRGTCYYILQQLKEKLPLVVIKGISTVSRALIHVNNKNQYELQIEGNGLGEVM
ATRGVRGTSTTSNHTMEVEKYLGIEAAK
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagagcagttcagagagtctcatctctcgaagaaaatctccaaaattagcttt
ggtttgcaaagtgctattgagatacgtcagcaagctcatgtttgctgtgtgagtatggct
ttatatgaaggaaatgctcatgaagcagtaccatatggagtgcttgatcctaaaatgggt
acaagccgtaagaatcagaaatgtgctacttgtggttaacaagtaagtgactgcataggc
cattttggatacattgatttaaaattacccgtcttccatgttggcttttttaggtctact
atcacaattctgcaaacaatatgtaagacttgcagtagagttttgttgaattcaaatgaa
aggaaaaagttcagtgaaattttgaaacgccccaatattagttaccttcagaagaagact
ttaaggaaacaaattgttgatctttgtatgaagaaaagtgtatgtccttattgccaggca
gtgaatggtcaagtcaagaaagctgggtgtttaaaaattgttcatgacaaatacaagaaa
gagaagcgaagtgatcctgtattgttggaatatttggaggaatttgatgaagctatgaaa
aataataaggagttagaacattgtaaaaataaactgactcaaataaatttggatccttta
aaggttttggatcttttcagaagaattgttgatgaggatattcctctccttttgatgaat
ccacatgttggacgaccagaacatttaattctgacaaaactaccagttccaccattgtgt
attcgaccttctgtgatatctgaagtcaaatctggaacaactgaagatgatatgactaca
aaattaactgctttaattcagctcaatcaagaaattcagatgcatggtactagtgctcct
ttaaaacatgtgatgaaagtctgggataacttgcaaactcatgttgcactatatataaat
agtgatatgtctggtgtaaatatggaaatgcagttagtgaagccttctggaaggggtatt
gtgcaaagattaaaaggaaagcatggtcgtttccggggaaatttatctggaaaacgtgtg
gaatttactggtcgaacagttatttcaccagatccaaatttaccaattgaccaagttgga
attcctgaacatgtagcaaaaattttgacatatcctgaaatggtaacaaagcataacatg
aagcgattgaaagcattaatcttgaatggtggctataaacatccaggagcaaatttttat
attgaacgtaacactaaaatgaaaagtgatctgaattatgcaaacaggcggcgaattgct
gataatttgaaatgtggtgatatcgtagaacgacacatgctcgatggtgatgttgtgtta
ttcaatcgacagccatctctgcataagctcagcattatggcccataaggcaaaaattgtg
cccactcgaacatttcgatttaatgaatgtgtttgcactccatacaatgccgattttgat
ggggatgaaatgaatattcatttgccacaaacagaggaagctagagctgaagctttaatc
ttaatgggggtgcaatcaaatttagttactcctcgaaatggagatccattggtcgctgca
attcaagattttatcacaggagcctttcttttgactcaaaaagatacattttttacaaga
gaagaagcacagcagataattgctagtattctttcaaatgaagataggctgatgagaata
gacttaccgccaccagcacttataaagccatatgtactgtggactggtaaacaaatattc
agtttgatactcaagcctaacaaatctagcaaggtgttaatcaactttagaaaagggcct
aaaggaagaacgaaatcaccatacactacaaatgaagaactgtgtcccaatgatacattt
gttattataagaaacagtgaacttttagccggcactatgagcaagcagactcttggatca
ggctcaaagactactatattttacatattgttgcgagattatggtaaaagttatgctgca
aatgctatgttgagacttgctcgactgtcttcatactttcttgccaatcgaggattttct
atcggaattggagatgttacacctggtgctggtttgttgaaagaaaaagaaaaattattg
catgatggatatgctaaatgtgaagaatacatccaaagtttgcagaaaggagaattagaa
actttacctggatgtaatgaagaagagactttagagggtaaaattatggctgaattatct
gctattcgtgaacgggctggtcagatatgtcataaagaactgcataagacaaacagtcct
ttgatcatggcccagtgtggatctaaaggatctaacatcaatatcagtcaaatggttgct
tgtgttggacaacaagctataagtggtcacagagttcctgatggttttgaccaacgatct
ttgccacattttaaaaggaatagtaaaactcctgaagctaagggttttgttcagaatagt
ttttattcagggcttactccaactgaattcatatttcatacaatggctggaagagaaggt
cttgttgatactgctgtgaagacagctgaaactggttatatgcagagacgattaattaaa
tcactggaagatttatgtcttcattatgattcaagtgttcgaaattctgtgggtgaagtt
gtgcagtttgtgtatggtggcgatagcttggatcctgcttctatggaaggaaccaataaa
tttgaaactcagaagaaaaaagtagatgaatattgtataaaaaaggatgatgatcctcca
gaggaacctgtaatttttgaacgtgctctctatcacattacagcaaagtatccatgtcca
gatgaattacctttggacccagaaactttaatgttcttaagtgctgaaattatcaatgaa
aattttatggatgttcatgaaaattatgtatcacaactttggaaattctttgcagatcaa
agtaaccggttacgaagagtcagagagaaatttggtacttttgcaatgagtgatgttcca
cctgttttgcgtcatttagagagagtcacaaaaactcagctgaaagagttccttaacttc
tgcaaagaaaagtatatgaaagcaatgattgaaccaggtactgctgtgggtgctatttgt
gctcaaagtattggagagcctgcaacgcaaatgactttaaagacatttcactttgctggt
gttgcctctatgaatattactcagggtgttccaaggataggtgagataataaatgccagc
aaagttataagtactcctgttattacagcattattagatgtaaatgatgacctggaattt
gctagacgtgttaaaggaagaatagaaaaaacccttttaggagaggtgtctgattacctt
gaagaggtttttcttcctgacagttgcttcatccttgtcaagctaaatcttgaaagaatt
cggttattacaacttgaagtgaatgctgagactatactttactccatctgtactacgaac
attactgaaataaaaggaatcaagccacaaaatataaccattcataaaaaggatgttttg
ttggtaaaaccttttgtcagttcccgtggcacttgttattacatattacagcaactgaag
gagaaactccctttggtagtcatcaagggtatttcaactgtgtctcgtgctttaatacat
gtgaataataaaaaccaatatgaattgcaaatagaaggcaatggtttaggagaagttatg
gccactagaggtgtccgggggacttctacaacttcaaatcacacaatggaagtagaaaag
taccttggcattgaggcggcaaagtaa
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