KEGG   Stegodyphus dumicola: 118193811
Entry
118193811         CDS       T07385                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
sdm  Stegodyphus dumicola
Pathway
sdm03013  Nucleocytoplasmic transport
sdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118193811
  09122 Translation
   03013 Nucleocytoplasmic transport
    118193811
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdm03019]
    118193811
   03041 Spliceosome [BR:sdm03041]
    118193811
Messenger RNA biogenesis [BR:sdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     118193811
Spliceosome [BR:sdm03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    118193811
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR3_2nd WD40_Gbeta WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 118193811
NCBI-ProteinID: XP_035220852
LinkDB
Position
Unknown
AA seq 182 aa
MEGHMDYVHCVDLGNSSQECLSGSEDGTVRMWDARKGGNAVHVIEPYKHNLSSRPELGKW
IGCLAFDSSDDWLVCGGAPSLCVWHIRSLSPSTKMQKPHMTSNVVHFYDDMVISAGSEPY
INHWSLDGNLQIEVPVAATTVLTLGINSSPTQQVLSAAGSSYKIDVCTDFRYKDFSLFFC
DS
NT seq 549 nt   +upstreamnt  +downstreamnt
atggaaggccacatggattatgttcattgtgtggatctgggaaacagcagtcaagagtgc
ttatctggaagtgaagatggtactgttagaatgtgggatgctagaaaaggtggaaatgct
gttcatgtcatcgaaccttacaaacataatctttctagcagacctgaacttggaaaatgg
attggatgtttagcatttgattcttctgatgactggttggtatgtggtggtgctccttct
ctctgtgtgtggcatattcgttcactttctccttcaacaaaaatgcagaaacctcatatg
acttctaatgttgttcatttttatgatgatatggtgatatctgctggttctgaaccatat
ataaatcattggagtttagatggtaacttgcagattgaagtgcctgttgctgctacaaca
gtgttaactttaggcataaattctagccctacgcaacaggttcttagtgctgcaggaagc
agttataaaattgatgtctgcactgattttagatataaagacttctctctgtttttctgt
gatagttaa

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