Stegodyphus dumicola: 118194141
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Entry
118194141 CDS
T07385
Name
(RefSeq) vacuolar protein sorting-associated protein 13C-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
sdm
Stegodyphus dumicola
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdm04131
]
118194141
Membrane trafficking [BR:
sdm04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
118194141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_VAB
VPS13_M
VPS13_N
Motif
Other DBs
NCBI-GeneID:
118194141
NCBI-ProteinID:
XP_035221217
LinkDB
All DBs
Position
Unknown
AA seq
2239 aa
AA seq
DB search
MIVEFLQNIPLPHSPNDEMDSSSFREVQLCSHTLRDPTGTDLKEVWKRLHRKSKPKLLTS
PQAESQRPSGVLERSFSDQSDEEEAFSAAEHWARVIDLPGFEDNVSASNYIRILFRLVAG
EVSIHLARSSDHTDKPYLMLRAEKLCVDAAHMEYGPALQASLHRIRLVDKLHKGSSGEYL
ELISSENAADMITVLYRKVQANCPEFKSHFHQVEHSLVLDVSALSVAFHREAFVTLARFL
QYVAAKLKPKSSSFRLAGVPNPTDLVITDSSDPPVPPGATKFSISARMNALRVRLCDTDL
ELAELRVMGLETDYVLKANEKSVLRVDLKELSMEDLMEDTLYRKILSTEGDKVFDIKWVR
RSPHHKEVMEGRKTNSLPVRVDGSLNLRFGRIAIVLLHSFANELHRFLEPFLNPDTTTFV
KKSTEEKLINKVSELQQSGLRYQVSVEIQAPTVLFPQKATSPNALILQLGELSVENFFQE
EQDYCMDNLLVRLHALQLARAVILLDSRMEIREPILEPLKLRLDIKRALKPYPKDGLLYQ
VNGSMDLIKVNIGQRDLSSMIAIYQDNYSQLQFLDNHKTDVSPDTESGPEESVRKLEVFL
FASTDVRRESSFAFIMEGLTLTLYTDAEDLMALPSRQMFNSIQVVFGIQDQALTSFTLDE
ASFSLETTNDKTLELKCSCQAATLIDIRAPKNSSLRKIFQSYSGDFGGTTGVAGISLSMP
PMVDLTYRRTAGGDSSVNAVVEKIRLNVSVSYLLGVLKFVSDALPGSRLPSSSAFLDGED
GRRRLPSDCTSGYHSTISSDEMRAMSVSVVFRKPEVVLFAQPDTPDTAVLVLKMDVMLDY
NFNLGQGNFMLSVAGLHVLSCVYGRRKHTMVTVLHPCELELNRQLILADEEVKMSFNLTS
VQLCLSAPVVQTVLQVSRQLLKSIQEDEDKRSYRQEKEKQAARDMWCPTSIFPEMWKEPE
CTCGYNRPPFILPKYAERLVFSIPEITVWCEITGVMKNVPVIYAKGAFEAEFKNWSTQMN
ANGEIRMEVMYYNEKVSTWEPFIEHVMVREGEYRPLEVMFKMFRDRAHPMVCTGSDEVEC
NTHPVTMTDAPSVSSYSSLSSSGNETEEEDVITTTVIRRRVPVRTKRLSSIAKSRDSSSF
VAYPGDSDSENEDGVLEKIASTFDHLFSEDEEGASDDPPSDSEGIADLDVHSDSGETETA
DNEDVFDDAAPVFSSPHRHHEHRTVDPIVETAIYLTVDCRDTINLNVTPAIISVLQEVLQ
EFTSADMKLPSAVCSEEHKELLLRNSLGPETTLQILQEEGGSFRVAEETKGWAPKASAPD
PDLVTPLVDISPADSDSEMAGDENDGFFMSGFPAPSAAKKPLPSDALYEEKSITQLYEAS
TQEKIVIDMEGFDKMACLLPQRSATIIYALQPVKNKTRYFVLVSTEIQHGQRIVTVRSPL
KIENHLGRPVQVLCEKAVLESAGASAENYSKNPFQDKFVRLTTLNPGQIYDLPLLVAYHC
KLYLKPLPTETDHQEYSLSSEGIWWKDMTVPQKSSKFLECRAVNNTGSVSTTKVVCEENR
DLKTPSVGTKLVPNFCLLLYPPVVFHNLLPLALDVHIKSKDQLMRLQEGESAVFFDFDYR
HPHDVLVEVGQYVGLQWHGKMTISGDTEEHHPISMNPETDTGGGNRHLALHVHVTRDRSL
DLYIFAPYWIINKTGLPLQFRGAMSDAVYEAACTADPLLFRFKKHRKKKAKLRVYSSQWS
RSFSLDTVGNCGVVICSDKERNKKYHFFVSVQMSKMLLTRVVVIKPFFLVVNNTDNHLRF
MEKNEATDLWFDIAPDKSLPFWPDTDSMKMFVKLRDSKTVSQHFPVDISHVTVLRMEHGS
ALTVEVKSEEDAPTTISFQQYVPGDAPVRVDNCCEDLFLKIHQKSQSPVTLLNPYQSVLY
TWDDPSQERTLIWNLYNRKKVGFPARISRDGYGFEKVSFHSLRKTLQQQPSVRTSSMDES
SSSDDDSESEDGLLPKKTRKDKVVVHWVSYVEKEQRVLLFTQDDRIARIARKSVDGERAS
MEFFLSLRGVGVSLINDAYREVAYASLTSCPAIWEIEINHSWKLLTLELSAWLEDKWSAD
QHKAQLKEYLQVDLSKMQMMKPFFGQLRRFYSPAFWCQIRKSRNQTYAHLRIHRFQVDNQ
LPDAIFPTVLYPGTTPQYVVRRSGPKPFFETALLLHSSRSNKTLKFWKVLIQEMHLCLDK
GFLVSLQDMCGYFSQSSDE
NT seq
6717 nt
NT seq
+upstream
nt +downstream
nt
atgattgtggaatttcttcagaacattccacttcctcactcccccaatgatgaaatggat
tcctcttcctttagagaagttcaactgtgcagtcatactctcagggaccctacgggcaca
gatttgaaagaagtctggaagaggcttcatcgaaaatcgaagcccaaattactcacttct
cctcaagctgagtctcagagaccaagcggggtccttgaacgttctttttccgatcaatca
gacgaggaagaagcatttagcgcggcagaacactgggcccgagtaatcgacctgcctggt
ttcgaagataatgtttctgccagtaattatattcgtatcctcttcagactagttgcaggc
gaagtgtccatccaccttgcgcggtctagtgatcatacagataagccttatctcatgctc
agggccgaaaagttatgcgtagatgctgcccacatggagtacggtccagcactacaggcc
tccttacataggatacgcctggtggacaagctgcataaaggctcttctggagaatatctg
gaacttattagttcagaaaacgcagcagacatgataactgttctctacagaaaggtacag
gctaattgccccgagttcaagagtcattttcatcaagtggagcattctttagtgttggac
gtcagcgctctttcagtggcttttcatcgcgaagcttttgtaacgttggcgagatttctt
cagtacgtcgctgctaagttgaagccaaaatcctccagcttccgtcttgctggcgtgccc
aaccccacggatctggtcatcaccgattcctccgatccaccagtgccaccaggagccaca
aaattcagcatctccgccagaatgaatgctcttcgcgtccgtctctgtgacacagactta
gaactggcagaacttcgagtgatgggactggaaacggattatgtattgaaggcgaacgag
aagtccgttcttcgcgtcgacctgaaagaactcagtatggaagatctcatggaagatact
ctctacagaaagatattatcaacagaaggcgataaagtttttgacattaagtgggttcgt
cggagtcctcatcataaggaggtgatggaaggtcggaagacgaattctctacccgtgcgt
gtggatggaagtttgaatctgcgtttcggaagaattgccattgttctactgcatagtttc
gctaacgagctgcacagatttctggagcctttcttgaatcctgatactactacgttcgtc
aagaagtctaccgaagaaaaacttataaataaggtgtccgaacttcaacagagtggcctc
cgctaccaagtatccgtcgaaattcaggctccaacggttctgttccctcaaaaggcaact
tctcccaatgcactcattcttcagttaggggaactgagcgtcgaaaacttcttccaagaa
gagcaagattactgcatggataatcttttagtacggctgcatgctctccagctagccagg
gccgtgatccttctggatagccgaatggaaattcgagaacccatactagagccactgaaa
ctgcggttggatatcaaaagagctcttaaaccatatcccaaagacggcttgttatatcaa
gtaaacggaagcatggatctcattaaagtgaatattggacagagagacctcagttccatg
atcgctatctaccaagataattattcccagctccaattcttggacaaccataaaacagat
gtctcaccggatacagagagtgggccagaagagtccgttcgtaaattagaagtttttctc
tttgcatctacagacgtacgcagggaaagctcttttgctttcatcatggaagggctaacg
ctgacgctttacaccgatgctgaagatctgatggcgctgccgtcgcgccagatgtttaat
tccattcaagtagtgttcggaatccaggatcaggctttaacatcttttactttggatgaa
gcgagtttttcactggaaactacgaacgataagaccttagaactgaagtgctcgtgccag
gcagccacacttattgacattcgagcaccgaagaactcttccctcagaaagatattccag
tcctacagcggtgactttggcggcacgacgggtgtggcaggcatcagcctcagcatgcca
ccgatggtggatcttacttatcgacgcaccgctggcggcgattcgtcagtgaatgcagta
gtggagaagattcgcctcaatgtgtcagtttcgtacctactgggtgtcctaaaatttgtg
tcagacgctcttcccggcagccgattgcccagttctagtgccttcttagatggagaggac
ggccgcagacgacttccatccgattgtactagtggataccactccaccatcagctccgac
gaaatgagagcaatgtccgtgtccgttgtcttccgcaaacctgaagtcgtcctctttgcc
cagccggacaccccggatacagctgtgctagttcttaagatggatgtgatgttggactac
aattttaacttaggtcaaggtaacttcatgctgtcagtcgctggtctacacgtactgtct
tgtgtgtatggcagaaggaaacataccatggtcacggttctgcacccttgtgagctggaa
ctgaatcgtcaactgatcttggcggatgaagaagtgaagatgtccttcaatctgaccagt
gtccagttgtgtttaagtgcacctgttgtccagacggttcttcaagtttcaaggcaactg
ctcaagagcattcaggaagacgaagacaaacggagctaccgtcaagagaaagaaaaacaa
gcagctcgagacatgtggtgtcccacttcgatatttcccgaaatgtggaaagaaccagaa
tgcacgtgcggctacaatcgcccgccttttattcttccgaagtatgcggagaggctcgtt
ttcagcattccagaaataacagtatggtgtgaaataaccggagtgatgaaaaatgttcca
gtcatctatgctaagggtgccttcgaagccgaattcaagaactggtcgacacagatgaac
gcgaacggagaaattcgaatggaagtgatgtattacaatgagaaagtgtctacttgggaa
cctttcatcgaacacgtaatggtgagggaaggtgaatatagacccctagaagtgatgttc
aaaatgtttcgagaccgtgctcatcccatggtttgcaccgggagcgacgaagtggagtgc
aacacacatcccgttaccatgactgacgcaccgtccgtctcctcatactcttcgttatct
tcttctggtaacgaaactgaagaagaggatgtgattaccaccacagtgatcaggcggagg
gtaccagtccgtacaaaaagactctcctccatagctaaatcgagagattcttcaagcttc
gtggcatatccaggagattcggacagtgagaatgaagatggagttcttgaaaaaatcgct
tccaccttcgaccacttattctcggaggacgaggaaggggcatcagacgatcctccatcg
gattctgaaggcattgcggatttggatgttcattccgattcgggcgagacagagacggcc
gataatgaagatgtttttgacgatgcggcacctgtgttctccagccctcaccgtcaccac
gagcatagaactgtggatccaattgtggaaacggcgatttatttgacagtggactgcaga
gacaccatcaatcttaacgtcactcctgctatcatctcagtgctgcaagaagtgctccaa
gaatttacgtctgcggatatgaagctgccttccgccgtctgctccgaggagcacaaagaa
ctactcctgaggaattcgttaggtccagaaaccacacttcaaatcctgcaggaggagggt
ggatctttccgcgtggctgaagagacaaaagggtgggcgcccaaggcctctgcaccggac
ccagacctcgtgacgccccttgtcgatatcagtcccgcagactcggattccgaaatggca
ggcgacgaaaacgacggcttcttcatgagcggttttccagccccatccgctgctaaaaaa
ccactgccttcggatgctttgtacgaggagaagtcaataactcaactgtacgaggcatct
acgcaagaaaagattgtaattgacatggaaggttttgacaaaatggcctgtctactccct
caacgatcggctactataatttatgcactacagccggtgaagaacaaaactcggtatttt
gtattggtgagcactgaaatacagcatggacaacggattgtgactgtccgttctccactc
aagattgagaaccatctgggccgccctgttcaggtactgtgtgaaaaggctgtcttagaa
tcggcgggagccagtgcagaaaattactccaaaaatccgttccaggacaaatttgtccgt
ttaacaactctgaacccggggcaaatatacgatctgccattgttggtggcgtatcattgc
aaattgtatctgaagccccttccaaccgaaactgatcatcaagagtatagcttgagcagt
gagggtatttggtggaaagacatgacagtaccccagaaaagcagcaaatttctggagtgt
cgagcagtcaacaacacaggaagtgtttccactacaaaggttgtgtgcgaagagaatcga
gatctcaaaactccatctgttggcacaaaacttgtacccaatttctgcttgctcctctac
ccacccgtcgtgttccacaacttactgccccttgcactcgacgtgcacattaagagcaaa
gatcaattgatgcgattgcaggaaggagaaagtgctgtgttctttgacttcgattatcgc
caccctcacgatgttcttgtagaggtgggccaatatgttggtcttcaatggcacggtaaa
atgacgattagtggtgataccgaagaacaccacccgatcagtatgaatcccgagacggac
acaggtggtggaaacagacatctcgctcttcatgtgcacgtgactcgagatcgtagtctg
gatctttacatcttcgctccttactggatcatcaacaaaacaggactgcctctacaattc
aggggtgccatgtccgatgccgtttacgaagcagcctgcaccgctgatcctctgttgttt
cgcttcaagaagcatcgcaagaaaaaggctaaacttcgagtgtacagttcacagtggtct
cggtcattttctttggacactgtaggcaactgcggtgtagtcatctgctcggacaaagaa
agaaacaagaaatatcacttttttgtgagtgtccaaatgtcgaagatgctactgacaaga
gtcgttgttatcaaacccttcttcttggtcgtcaataacactgacaatcacttgcgtttc
atggaaaagaatgaagcgaccgatctgtggttcgacatcgcacccgataagtctcttcct
ttctggccggacactgactcgatgaagatgttcgtcaaacttcgagacagcaaaacagtt
tctcagcatttcccagtggacatctcgcatgttactgttctaaggatggaacatgggagc
gcgcttacagtggaagtgaaatccgaagaagatgcaccaacgacaatctcattccagcag
tatgtaccaggtgatgctccagttcgagtcgacaactgctgcgaagaccttttcctcaaa
atacaccaaaagtctcagagcccagtgactctacttaatccctaccagtccgtcttgtac
acgtgggacgatccgagccaggaacgaacccttatctggaacctctacaacagaaaaaaa
gtcggatttcctgcacgtatttcacgagatggttacggttttgagaaagtctccttccat
tcgctcagaaaaacattacagcagcagccttctgtgaggacgtcttccatggacgagagt
agcagctctgacgacgatagcgagtccgaagacggtttactaccgaagaaaacaagaaaa
gataaagtggtcgtccactgggtatcttacgtggaaaaggaacagcgtgtcttgctcttc
actcaggatgacagaattgccagaatagcaagaaagagtgtagacggagaacgtgcatcc
atggaattcttcttgtcgctacgtggagttggtgtatctctcattaatgatgcttatcgc
gaagtggcctacgctagtttgacatcctgtccagcaatctgggaaatcgagattaaccac
tcgtggaagcttctgacactggagctgtcggcttggcttgaagataagtggtcagctgac
cagcataaagcacaactcaaggagtatcttcaggtggatctaagcaaaatgcagatgatg
aagccattctttggtcagctcagacgcttctacagtccagccttttggtgccaaatccga
aaatcgcgcaatcaaacttatgctcatctcagaatccatagattccaggtggacaatcaa
cttccagacgccattttccccacagttctctaccctggtactacgccccagtatgtagtg
cgaagaagtggacccaagcctttcttcgaaactgcccttcttctgcactcctcgcgttcc
aacaagaccctcaaattttggaaagtattaattcaagaaatgcatttgtgtctggacaaa
ggcttcttagtttccctgcaagacatgtgcggctatttcagccaatcatctgatgag
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integrated database retrieval system
