Stegodyphus dumicola: 118194294
Help
Entry
118194294 CDS
T07385
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B-like
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
sdm
Stegodyphus dumicola
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdm03021
]
118194294
Transcription machinery [BR:
sdm03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
118194294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_N
Rrn7_cyclin_C
Zn_ribbon_RRN7
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
118194294
NCBI-ProteinID:
XP_035221406
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MKCQICGGSDFFIDAGAYYCNECGEANKQTEEQTGNDEVLINRNLVSSQKATKEHAKHKP
KLYSSWLTPEAYNIILYKQVSALIRLGASAKLKDVVLYMWSRFLQKCEMAFWNSDSTSNK
VFHLDVFPTKRDFKLLHGDKIATKKKKYYKGKRIRKKLTEVKKNAGSEPESSDDVASLSS
EVTCNTDVSDASSYNSSSNRQKARHIYSSPARKFHRRFGSLKSAALHVRENCVHHMTLSK
TLCFCYLGLLYTGDQLLLSDLLRFVKEDRIPFRKAFTCLPPSMKLQNVDKAYFRKNTVPD
MHKISLWCAKLIEFLDLPRFKHRPLLPVISRFIKDLNLPDDLVSVVKVLVHKTEKQESEW
YELKKRTKSSYIPIPLYEVKALTFIIVALKMLFVLDGEFEIEHCEIMKKINILQKDVKLF
IWSEWKLHTQLKEYLFMPSELFPNFHRIDTLSVERILANYPIEPLCVLDDNKTVYQLNSG
SGFKDVLSDIVNIQQRSIYEPTSFPLKSQVRSFMEEWKTFYAFNETREIDFSILKEDFSS
HLILPKPSRDDAEENELLRLLLSTLYKSVKIFILDHSAPTANNIIRTSSKYWIKKFTHRL
LMSSKSEWLDKLPSSFKWLLIFLSNYIQANIAQLYCEIMHIEKKLYMK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtcaaatatgtggtggttctgattttttcatagatgctggagcttattattgt
aatgagtgtggtgaagcaaataagcaaacagaagaacaaactggaaatgatgaagtttta
attaatcggaatcttgttagttcgcaaaaagctacaaaggaacatgctaaacacaaacca
aaattgtattcttcttggttgactccggaggcatataatattatactttacaaacaggtt
tcagccttaatcagacttggtgcttctgcaaaactaaaggatgtcgttctttatatgtgg
tcaagatttcttcagaaatgtgagatggctttctggaattctgatagcacttctaataaa
gtatttcatttagatgtttttcccacaaaaagagattttaaattattacatggtgataaa
attgcaacaaagaagaagaaatattataaaggtaaacgaatcagaaagaagcttactgaa
gtaaagaagaatgctggaagtgagcctgaaagttctgatgatgttgccagtttgtcttca
gaggtgacatgcaacacagatgtatctgatgcatctagttataattcctcatcaaatcgt
cagaaagcaagacacatttattcttctcctgcacgaaagttccataggagatttggctca
ctgaaatcggcagctctccatgttcgagaaaattgtgttcatcatatgacactttcaaag
acactgtgtttttgttatttaggccttctttatacaggagatcagttactactgtcagat
ttgctaagatttgttaaagaagatagaatacctttcagaaaggcatttacctgtctacct
ccttcaatgaaactgcaaaatgtagacaaagcttattttagaaaaaatactgtaccagat
atgcataaaatttcactgtggtgtgctaaattgattgaatttctcgatcttccaagattt
aagcatcgaccattgttacctgtaatttctcgtttcatcaaggatcttaatttgccagat
gatctggtctcagttgtcaaagttttagttcataaaactgaaaaacaagaaagtgagtgg
tatgaattaaaaaagcgcacaaaatcatcttatattccaattccattatatgaagttaaa
gcactaacttttatcatagtcgcattaaagatgctttttgttttagatggagaatttgag
attgagcattgtgaaattatgaaaaaaattaacattcttcaaaaagatgtgaaactcttt
atatggagtgaatggaagctgcacactcaactcaaagaatatttatttatgccaagcgaa
ttgtttcctaacttccatcgtattgatactctaagtgttgaaagaattttggctaattat
ccaattgagccattgtgtgttcttgatgataataaaactgtgtatcaattaaattcaggc
agtggatttaaagatgtgctgtctgatattgtaaatattcaacagagaagtatctatgag
ccaacatccttcccactaaaatctcaagttaggagctttatggaagaatggaaaaccttt
tatgcatttaatgaaacaagagaaattgatttcagtattttgaaagaagatttttcgtct
catttgattttacctaaaccatctcgggatgatgctgaagaaaatgaattgcttcgctta
ttactgtcgacactttataaatcagtaaaaatcttcattttggaccattcggcaccaact
gcgaacaatattatcaggacttcttcaaaatattggattaaaaaattcactcacagatta
ttaatgtcatcaaaatcagagtggttggataaactgcccagttctttcaagtggctttta
atttttttaagcaattatatccaggcaaatattgctcagctgtactgtgaaatcatgcat
atagaaaaaaaattgtatatgaaataa
DBGET
integrated database retrieval system
