Stegodyphus dumicola: 118195635
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Entry
118195635 CDS
T07385
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03013
Nucleocytoplasmic transport
sdm03015
mRNA surveillance pathway
sdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118195635
09122 Translation
03013 Nucleocytoplasmic transport
118195635
03015 mRNA surveillance pathway
118195635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdm03019
]
118195635
03041 Spliceosome [BR:
sdm03041
]
118195635
Messenger RNA biogenesis [BR:
sdm03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
118195635
Spliceosome [BR:
sdm03041
]
Common components
Common spliceosomal components
Cap binding complex
118195635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
tRNA_bind_2
Uds1
DUF3195
ISG65-75
Seryl_tRNA_N
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
118195635
NCBI-ProteinID:
XP_035222856
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
YLDCLWAQINKLRSDKWVEHHILRPYLAFDGVLCEALQHSIPSMLPPPHQDGCSYPFPSV
VFRLFDYTDCPEGPVLPGAHSIERFLIEEQIRRIVEQQYLCRKECAAILLSYPGKHKIPL
EYVIVEVILAEFFKLPVSTYKEICLGSLFLELCKLQPSTMPQVLAQAVELMYERLDTMNI
DCINRFSSWFAYHLSNFQFRWNWDDWNDCISLDPLHPRPVFVRETLHKCLRLSYYQRIVD
LLPENFVNLLPLKPVTVYKYAQEGAEVLPGTVAAQQLTAAFKEKCTAEEALLLIKDLPNP
LQEDDVEPTHNPLKIDVFVQTLLNFADKSFSHAFAAIAKYHTVFKVLSTSEEAQICILRS
MFELWHCHQHMMVGLVTKFLKAKIVECSAVANWLFSKEMSTEFPKSYIWEILHLTIRKMI
RYVTNIQKQVNDAKKKLQKDESMEDDDDDEDDSNHVRPSEEMIEEMEEKLDTAQSELKNL
FLIIFQRFIMLLTEHIARCEADGIDFNNYWFKSTLGRLQEVFFQHHEQVFKYVDTLESLL
FTSDIDHHILSVFTQFSALKA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
tatttggattgtttatgggctcagatcaataaacttcgttcagataaatgggtggaacat
catattttgcgcccttacttagcatttgacggagttttgtgtgaagcccttcaacacagc
atcccgtctatgctgccaccacctcaccaagatggttgttcatatccctttccatcagtt
gtgtttcggttgtttgactatactgattgtcctgagggaccagtattgcctggtgctcat
tctattgaacggtttttgattgaagaacaaattaggcgcatagtggagcagcagtacttg
tgtcgtaaagaatgtgctgctattcttctcagctaccctggaaaacacaaaataccactg
gaatatgtgattgttgaggttatattggctgagttctttaaacttcctgtatctacttat
aaagaaatttgtttaggctctcttttcttagaattgtgtaaattgcagccaagcactatg
ccacaagttttagcgcaagcagttgaactgatgtatgagagattagatacgatgaacatt
gattgtattaataggttttcaagttggtttgcttatcacttaagtaattttcaatttcga
tggaactgggatgactggaatgattgcataagtttagatcccctgcatcctagaccagta
tttgttcgagaaactcttcataaatgcttgaggttgtcatattatcaaaggattgtagac
ttattgcctgaaaattttgttaatttattacctttgaaacctgttactgtctacaagtat
gctcaagaaggagcagaagtcttgcctggaactgtcgcagcacagcaactgacagcagct
tttaaagagaaatgcactgctgaagaagctttgttgcttatcaaagatttacccaatcct
cttcaagaagatgatgtggagcccactcataacccattaaaaattgatgtctttgttcag
actctgctgaattttgctgataaatctttttctcatgcatttgctgctatagcaaagtac
catactgtgttcaaagttttatcaacttcagaagaagcacagatctgcatcttgaggagc
atgtttgagttgtggcattgtcaccagcatatgatggttggcttagtaacaaagttttta
aaagcaaaaattgttgaatgctctgctgtagcaaactggttattttctaaagaaatgtca
actgagtttccaaagtcttacatttgggaaatactgcatttaactattcgtaaaatgata
cgatatgtaactaacattcagaagcaagtgaatgatgcaaagaaaaaacttcagaaggat
gaaagtatggaagatgatgatgatgatgaagatgattcaaaccatgttcgtccttcagaa
gaaatgattgaagaaatggaagagaaactagatactgcacagagtgaattaaaaaatctc
tttcttattatatttcagagatttattatgctgttaacagaacacatagctcgatgtgaa
gctgatggtatagactttaataattattggtttaaatctactttaggaaggttgcaagaa
gtattttttcaacatcatgaacaagtattcaaatatgtggatacccttgaaagtcttctg
ttcacaagtgatattgatcatcatatattgtcagtatttacacagttttctgcccttaaa
gcataa
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