Stegodyphus dumicola: 118195816
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Entry
118195816 CDS
T07385
Name
(RefSeq) tRNA-splicing endonuclease subunit SEN2-like
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
sdm
Stegodyphus dumicola
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdm03016
]
118195816
Enzymes [BR:
sdm01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
118195816
Transfer RNA biogenesis [BR:
sdm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
118195816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
VirC1
Strabismus
Presenilin
Motif
Other DBs
NCBI-GeneID:
118195816
NCBI-ProteinID:
XP_035223041
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MEENNASLLLTPAAKKNYHFTREFPFPIFRDENAAGPSDQEWKYVIGHLQEDCVVVYDDE
DIKLLFTKGFFGVGSLSKKVPRVCYSTRKSPDFRNQRKQQQQSSTSSFVNETSKNQTEDE
EIEVVNCEDDEDEKSADRKEGDEIEVVLSDSDDSMSEDEVAEIGENDSDSKSEEKEHLIL
TFEEAYFLSYGLGCLVVKDRGQSMDLLRLWNKFCELSVGQNFPIMYTAYHHFRSKGWVVR
SGLKYGTDYGKIS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaataatgcaagtttactattgactcccgctgctaaaaagaactatcatttt
actcgtgaatttcctttcccgatatttagagacgagaatgcggctggtccttctgatcag
gagtggaaatacgttattggtcatctgcaagaagactgtgttgttgtgtacgacgatgaa
gacattaagttgttattcacaaagggtttctttggcgtgggatcactatctaaaaaagta
ccccgtgtttgctattctacaaggaaaagccctgattttaggaatcaaaggaaacagcag
cagcaatcatcaacatcttcatttgtgaatgaaacatctaagaaccaaactgaagatgaa
gagattgaggttgtaaattgtgaagatgatgaggatgaaaaatctgctgatagaaaggaa
ggtgatgaaattgaagttgtactttctgattctgatgattctatgtctgaggatgaagtt
gctgaaattggtgagaatgatagtgattcaaagtctgaagaaaaagaacatctgatattg
acttttgaagaagcatactttttatcttatggattggggtgtttggttgtaaaagataga
ggtcagtccatggatttattgaggttatggaataaattctgtgaattatctgtggggcag
aatttcccgatcatgtataccgcatatcaccactttaggagtaaaggctgggttgtaaga
agtggactaaaatatggcactgattatggtaagatatcttag
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