Stegodyphus dumicola: 118196056
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Entry
118196056 CDS
T07385
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118196056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdm03021
]
118196056
03036 Chromosome and associated proteins [BR:
sdm03036
]
118196056
Transcription machinery [BR:
sdm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118196056
Coactivators
SAGA/TFTC/STAGA complex
118196056
Chromosome and associated proteins [BR:
sdm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
118196056
STAGA complex
118196056
TFTC complex
118196056
SAGA complex
118196056
SLIK complex
118196056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SPT8
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
RMC1_N
PROPPIN
Motif
Other DBs
NCBI-GeneID:
118196056
NCBI-ProteinID:
XP_035223320
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
GNGFWTIDFCAMLSSQLQEDQLHLDEIEGDPAIYEDTYVGLKKFIETALDTYRHELSMIL
YPVFVHMYLELVYNQHEAKAKYFMDKFGPEQEEYYLDDVKKLSCLTKKDHMKGNEFMDNF
RSGQFTVRLSRDTYNFLKRHLQDKKNNVLQNIIQEHLYLDVYEGISRTKQQIDSTAGALV
GEAARQANKGKVYYGLLKEPEIQIPVDEEDEPQEGDDKPKKKKPKKDPLLSKKSRNDPNA
PPGNRVPLPELRDADKLDKVNAMREALKRVRLGPNSLPSICFYTFLNSHQGVTCAEICED
SSLLSAGASDSVVRIWSLNTNKLKAMKPASELEQVDKEADDVLYRMMDERNAIDMRTLIG
HSGPVYSTSFSPDKNLLLSCSEDSTVRLWSLQTWTNVVCYKGHCFPVWDVKFSPFGYYFA
SCGHDRTARLWATDYHQPVRIFSGHVSDVDCIQFHPNSNYIATGSSDRTVRLWDVASGNC
VRFMTGHKGTVYNLAFSTCGRFLASAGSDKKILIWDIAYGHLLAELNSHTDTIYSLCFSR
EGTVLASGGLDNCIKLWDVTKLLEEIDLEDLNISHAPNVKVNTDAYLLGSFPTKSTPVLS
LHFTRRNLLLAAGMYHG
NT seq
1856 nt
NT seq
+upstream
nt +downstream
nt
ctggaaatggcttttggacaattgatttttgtgccatgctttcctctcaacttcaagagg
atcaactgcatctggatgagattgaaggcgatccagcaatttatgaagatacttatgttg
gtcttaagaagttcattgaaactgctttggatacatacagacatgaactttcaatgatat
tgtatcctgtatttgtacacatgtacttggagcttgtgtacaatcagcatgaagctaaag
ccaaatattttatggataagtttggaccagaacaagaagaatattatttggatgatgtta
aaaaattgtcatgtttgaccaaaaaagatcacatgaaaggaaatgaatttatggacaatt
ttaggtcaggtcagtttacggttagattgtcaagagatacatacaatttcctaaaacgac
acttgcaggacaagaaaaataatgttttacaaaatattattcaagagcatctttatcttg
atgtatatgagggcatttcaagaactaagcaacaaatagatagtactgctggtgcattgg
ttggggaagctgcaagacaagcaaataaaggaaaagtttattatgggctactgaaagaac
ctgaaatacagatccctgttgatgaagaagatgaaccacaagaaggagatgacaaaccta
aaaaaaagaaaccaaagaaagatcctctgttatcaaaaaaatctcgtaatgatcctaatg
caccaccagggaacagagttcctctcccagagttgagagatgctgacaaattagacaaag
ttaatgccatgcgagaagcccttaaaagagttcgccttggacctaacagtttaccatcaa
tatgcttttatacatttttaaattctcatcagggtgtaacttgtgctgaaatttgtgagg
attctagtcttctaagtgccggtgcttccgattctgtagtaaggatctggagcctaaata
caaataaacttaaagctatgaaaccagcttcagagcttgaacaagttgataaagaagctg
atgatgtattgtataggatgatggatgaaaggaatgcaatcgatatgagaactcttatag
gacacagcggtcctgtatattctacaagtttcagtccagacaaaaatttactgctgtcat
gttcggaagactctactgttcgtttatggagtctgcagacttggaccaatgttgtttgtt
ataaaggtcattgttttcctgtttgggatgtcaaatttagtccatttgggtattattttg
catcttgtggacatgatagaactgctcgactctgggcaacagattatcatcagcctgtta
gaatattttctgggcatgtatctgatgtagattgcattcagtttcatccaaattcaaatt
atattgctactggttcaagtgatcgtacagttaggctttgggatgttgccagtgggaact
gtgttcggtttatgacgggtcataaaggaactgtatataatctggcattttcaacttgtg
gtcgttttcttgcttcagctggttcagataaaaaaattctaatatgggatattgcttatg
gccatttattagctgaattaaacagtcatactgatacaatatattctctgtgttttagca
gagaaggaactgtcttagcatctggtggtttggataactgtataaaattgtgggatgtaa
ccaagttactagaggaaattgatctagaagacttaaatatttcacatgcccctaatgtaa
aggtcaatacagatgcttatctcttgggatccttccctacaaaatctacgccagtgttat
ctcttcattttacacggagaaatctcttactagctgctggaatgtatcatggatga
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integrated database retrieval system
