Stegodyphus dumicola: 118198058
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Entry
118198058 CDS
T07385
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
sdm
Stegodyphus dumicola
Pathway
sdm04140
Autophagy - animal
sdm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118198058
04148 Efferocytosis
118198058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdm04131
]
118198058
Membrane trafficking [BR:
sdm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118198058
Hops complex
118198058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_16
zf-RING_5
zf-RING_Vps41
zf-RING_11
Angiomotin_C
DUF948
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
118198058
NCBI-ProteinID:
XP_035225538
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MGSANVGDPPILQNVFNYYKDVPESYIELPGDLQYSKLQLHYPNSKALPKSFAWMTEPGV
MYGNINYSAKPPQNLIINKKLLSYPDDKGETKTPLSIVLTEFHVLVLFCDRLKVICVLNE
QLVFEDFFSETYGSLKGILKDPEKGTIWAFSDMAIYRYRIYREDRFIWEVYLDKNEYDLA
KEYCKGDPVKIDKVMSKQADDLFKKEKYEESAVIYAQTHSSFEEIALKFLVAEQEAALRK
FLLKKLAGLRSQDKTQITMIVMWLLEIFLNELGVLRTAGKQTTQEYVNLQKEFRSLLKES
RIKDCVSNNRSAVYSLMSSHGDEENLIYFTNLMKDFEKVIQYHLQHKNYRAALGVLNEHS
RPELFYQFSPALMQTNPKEIVDAWIAQDYRLNPVQLIPALVQYDSSKDPRQGSEAIRYLE
YCVNKMRVKDQAIHNYLLTLYARLQEKDKLMTYLQQQDEIDVPYDQKYALRLCSELQGFE
RACVHIYTTMGLYEEAVDLALKVDVELGKQNACRPEDNDDLKKKLWLKIAKHVVKEKNDI
KRAMEFLQECDLIKIEDILPFFPDFVTIDHFKDAICSSLQEYNQHIEGLKEEMEVATQNT
QEIRAETQTFRNKFSVVTAQEKCASCNYPIMGRSFYLFPCKHVFHSVCMIAEVLPHLSPT
KQNRVSEIQRQLSAFVGQEDSVSISSTSLMSAAVSTKDRLNAELDDLVASECLYCGDIMI
RSIDVPFLNMSEYSSVLQSWE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtgctaatgttggagatccccctatactgcagaatgtttttaattattataaa
gatgtacctgaaagctatattgaacttcctggagatttacagtatagcaaacttcagtta
cattatccaaattcaaaagccttaccaaaatcgtttgcttggatgacagaacctggtgtt
atgtatggaaatataaattattcagcaaaacctcctcagaatttaatcatcaacaaaaaa
cttctttcatatcctgatgacaaaggggaaacaaaaacaccattatctattgttcttaca
gaatttcatgttcttgtattattttgtgatagattaaaagtaatatgtgttttaaatgaa
cagctagtatttgaggacttcttctctgagacatatggttctttaaaaggcattcttaaa
gatcctgaaaaaggtacaatatgggcattctctgacatggcaatttatagatacagaata
tatagagaagacagatttatctgggaagtttatttagacaaaaatgaatatgatcttgcc
aaggagtattgcaagggagatcctgtaaaaattgataaagttatgtctaaacaagctgat
gatcttttcaagaaagagaaatatgaagaaagtgcagtaatatatgctcaaacacacagc
tcatttgaagaaattgctttaaaatttttagtggctgaacaggaggcagctttacgtaaa
tttctgctgaaaaagctagcaggtcttcgatcacaagacaaaacccaaataaccatgatt
gttatgtggctgctggaaatatttctaaatgaactcggtgttttgagaacagctggaaag
caaacaacacaagaatatgtgaatttacaaaaagaatttaggtctttgctgaaagaatcc
agaataaaggattgtgtgtctaataacaggagtgctgtttacagtttaatgtccagtcat
ggtgatgaagaaaatttaatatatttcactaatcttatgaaagattttgaaaaagtaata
cagtatcacctacagcataaaaattacagagcagcattaggagttcttaatgagcatagc
cgtccagaattattttatcaattttctcctgctttaatgcaaactaatcccaaagaaatt
gttgatgcttggatagcccaagactataggttaaatcctgtccagttaattccagcttta
gttcagtatgatagcagtaaagatcctagacagggaagtgaagctataaggtatttggag
tattgtgttaataaaatgagagtgaaggatcaagccatacataattatctactaacactt
tatgcaagacttcaagaaaaagataaactcatgacatatttacagcagcaggatgaaatt
gatgttccatatgatcagaaatatgcattgcgtctatgctctgagcttcagggatttgaa
cgagcatgtgtccacatatacacaacaatggggctttatgaagaagctgtagatttagca
cttaaggttgatgttgagttaggaaagcagaatgcctgtcgtccagaagataatgatgat
ttaaagaaaaaactttggttaaaaattgcaaaacatgtggtgaaagagaaaaatgatata
aaaagagctatggagtttcttcaggaatgcgatttaataaagattgaagatattttaccc
tttttcccagattttgtgacgatagatcatttcaaggatgctatatgttcttccctgcaa
gaatataatcaacatattgaaggtttgaaggaagaaatggaagttgcaactcagaatact
caggaaatcagagctgaaactcaaacatttagaaacaagttttctgtggtcactgcacaa
gaaaaatgtgcttcttgtaattatcctataatgggccgttcattttacttatttccttgc
aagcatgtttttcattcagtttgtatgatagctgaggttttacctcatctttcacccaca
aagcagaatcgtgtatctgaaattcagaggcagttgtctgcttttgttggacaggaagat
tcagtgtcaatttcttctacgtctttgatgtcagcagctgttagtaccaaagacaggcta
aatgcggaattggatgatcttgtggcgtctgaatgtttatactgtggagatataatgata
agatcaattgatgttcctttcctgaatatgtctgagtattcttcagtattacaaagctgg
gaataa
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