KEGG   Stegodyphus dumicola: 118198378
Entry
118198378         CDS       T07385                                 
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 4-like
  KO
K10755  replication factor C subunit 2/4
Organism
sdm  Stegodyphus dumicola
Pathway
sdm03030  DNA replication
sdm03410  Base excision repair
sdm03420  Nucleotide excision repair
sdm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    118198378
   03410 Base excision repair
    118198378
   03420 Nucleotide excision repair
    118198378
   03430 Mismatch repair
    118198378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sdm03032]
    118198378
   03036 Chromosome and associated proteins [BR:sdm03036]
    118198378
   03400 DNA repair and recombination proteins [BR:sdm03400]
    118198378
DNA replication proteins [BR:sdm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    118198378
  DNA Replication Termination Factors
   ELG1-RFC complex
    118198378
Chromosome and associated proteins [BR:sdm03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    118198378
DNA repair and recombination proteins [BR:sdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     118198378
  Check point factors
   HRAD17(Rad24)-RFC complex
    118198378
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_24 AAA_assoc_2 AAA_22 AAA_16 AAA_30 AAA_11 bpMoxR SLFN-g3_helicase AAA_5 Mg_chelatase DNAX_ATPase_lid RuvB_N Cdc6_lid AAA_7 ResIII AAA_28 RNA_helicase AAA_19 DUF815 AAA_18 AAA_3 AAA_25 RPA_interact_N
Other DBs
NCBI-GeneID: 118198378
NCBI-ProteinID: XP_035225930
LinkDB
Position
Unknown
AA seq 362 aa
MEAFLKGYKAGIKQKSSLLKNDSNGPSSTKKSKRPSPWVEKYRPKCMDEVVYQEEVVAVL
KKSLVKPDLPNLLFYGPPGTGKTSTILALSREIFGDMFHSRILELNASDERGIQVIRDKV
KSFAQQTASAVRPDGRPCPPFKIVILDEADSMTNAAQSALRRTMEKASKSTRFCLICNYI
SRIIEPITSRCSKFRFKPLSQETLTERLSYIATEENVKLEDGVLDAIIDFAEGDLRKAIT
LLQSSHRLKGDEGVTVADLXLSESAVPIKWIKELITVCESDSYEKLEKFVCNLMYEGYTT
GQVINQLHDEIVFSDVFSDKQKSAICEKIAICDKRLIDGADEYLQLMDLCCSIMQQICHP
TE
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggaggcctttttgaaaggttataaggctggaataaaacaaaaatcttcactactaaag
aatgattcaaatgggccttcaagtaccaaaaaatctaaaagaccttctccttgggttgaa
aaatatcgtccgaaatgtatggatgaagtggtatatcaagaagaagtagttgctgttttg
aaaaagagcttagtaaaacctgatttgccaaatttattgttttatggcccgcctggtaca
ggaaagacatcaacaatacttgctttatcaagagaaatatttggagatatgttccattca
cgaattttagaactaaatgcatctgatgagcgaggtattcaagttataagagacaaagtg
aaatcatttgctcaacaaactgcaagtgctgttcgccctgatggtcgaccttgtccacca
ttcaaaatcgttatccttgatgaagcagattcaatgacaaatgctgcgcaatctgcattg
agacgtaccatggaaaaagctagcaaatctacacgtttctgcctcatatgtaactatatc
agtaggataattgaacctataacatctcgatgctctaaatttcgatttaagcctttatca
caagaaaccttgacagagaggttgagttatattgcgacagaagaaaatgtgaaactagaa
gatggtgtcttagatgctattatagattttgcagaaggtgatcttaggaaagccattaca
ctactacaaagctcccatcgattaaagggggatgaaggagttactgtagctgatttgtga
cttagtgagtctgctgtccctatcaaatggatcaaagagttaattactgtttgtgaatct
gatagttatgaaaaattagaaaaatttgtttgtaatcttatgtatgaaggttatacaact
ggccaagttataaatcagctccatgatgaaattgtattcagtgatgtttttagtgacaag
cagaaatcagcaatttgtgaaaagattgccatttgtgataaacgtttaatagatggagca
gatgaatatttgcagttgatggacctgtgctgttctataatgcaacaaatctgtcacccc
actgagtag

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