Stegodyphus dumicola: 118199044
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Entry
118199044 CDS
T07385
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
sdm
Stegodyphus dumicola
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdm03021
]
118199044
03036 Chromosome and associated proteins [BR:
sdm03036
]
118199044
Transcription machinery [BR:
sdm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
118199044
Chromosome and associated proteins [BR:
sdm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
118199044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
SH2
Spt6_S1
HHH_9
HHH_3
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
118199044
NCBI-ProteinID:
XP_035226722
LinkDB
All DBs
Position
Unknown
AA seq
1536 aa
AA seq
DB search
MADFLESEAEESEDEIINRKRKMSDDEDDEEEEEDGLNDEEKLREEMKDLINDDEEEEEE
DDKDESDEEVSRKKKKRHDDFDDRLEDEDYDLIEENCGIKVRRKKKFKRLKRIEDEESDD
GDAEDGDDREAIANELFEGDDMEGEDEAPRQPADDSQLAVEESGEESDESDFIVDDDGQP
LSKGKKKRHIKYTDSALQEAQEIFGVDFDFDMVDQEGDEYEEEIEEEYEEEEEDEEGGEV
QPRPKKTRKRMPKKSIFDVFEPIELERSHLTDLDNEIRAADIPERFQLRNVPVTEAADDE
IEEEAEWIYKQAFSIPTISIQEGEHSGSGHQPIGGRKNTSAIGKIREALNFIRNQKFEVP
FIAFYRKEYVEPDLNINDLWTVYKWDEKWCQLRARKKNLQRLFEKMQQYQCDEVMSDPEK
PLSEGLRALDNGDIFRLTKAQTVEEVQDCYLHFMLYYGHDVPAMKEALKKKEMKEKELEG
KEVPEEEQEVESTKIKHVPHKDAYAVCKEAGIDGLAKKFGLTPEQFGENLRDNYQRHEVD
QYPVEPKEVASDYICKRFSTPEECLSAAKFMVANQISKEPAVRKCVRQTYFERAKISVRP
TKKGIKEIDENHPCYSMKYLKNKPVKDLRGDQFLKLTMAERDGFLTITIAMDKQGSNDGR
HVFLEEIKQLYERDEFSKNVQEWNAQRQQALEIALTKLLYPTFQKELRLRLLNEAKEGVI
KACCRKLYNWLKVAPYQVDPQIEEEDDFDTRYGTRVLAIAYSPTREVPAFSALVDGDGEV
LEFLRLPYLLNRRNAWREKDRILKEKDLNSLKNLILSKKPHVVCVAAESREALMIVDDVK
MIINDLMDSDQFPPISVELMDNELGVLYMNSKKGEYDFRDYPPLLRQAISLARRLQDPLM
EFSQMCTPDEEILCLKYHPLQDELNKEDLLNALYLEFVNRTNEVGVDFNKAVEFNHTANL
VQFICGLGPRKGGFLVKTLKICNKQLESRTQLVTVCKMGPKVFINCAGFIKIDTASLGES
TQTYLEVLDGSRVHPEAYEWARKMAVDALEYDDTSDDANPAGALDEILENPEKLKDLDLD
AFAEELERQGYGNKSITLYDIRAELNHKYKDLRTPYRPPNTEEVFNMLTKEVPETFYIGK
LILVVVTGIARRKPKNDQLENANPIRNDDSGLWQCPFCLKKDFPELSDVWSHFDDASCPG
QAMGVRVRLDNGISGFIPTKMISDKHVINPEDRVKIGLTLHARITKIDIERFAVDLTCRS
SDLSDKNNEWRPPKDLYYDYEAEEKDHKIEDAAAKQQNRQVYLKRVIVHPSFKNVSFKEA
EKILDTMEQGEVIIRPSSKGSNHLTVTWKVADGINQHIDVREEGKENEFSLGHSLIIGDE
SFEDLDEIIARHVQPMAGFARDLLNFRYYVDADGGKKEEMEKILFEEKKKVANKIHYYVS
ASRMFPGKFLLSYLPRNKVRHEFITVLPEGLRYRKRVFRSVNSLFRWFKEHFRDPIPGTP
TAMSVRTPMGQSSYIGNTPSINLASMFKSYFFHLIT
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttcttgaaagcgaagcagaagaatcggaagatgaaattattaatcgtaaa
cgtaaaatgtctgatgatgaagatgatgaggaagaggaagaagatggactcaatgatgaa
gaaaagttacgtgaggaaatgaaagatttaattaatgatgacgaagaggaggaggaagag
gatgataaagatgaatcagatgaagaagttagtagaaaaaagaagaaacggcatgatgac
tttgatgatagattagaagatgaagattatgatttaattgaagaaaattgtggtatcaaa
gtccgaaggaaaaagaagttcaagcgacttaagcgaattgaagatgaggaaagcgatgat
ggagatgctgaagatggtgatgacagggaagcaattgccaatgagctctttgagggtgat
gatatggaaggagaagatgaggctcctcgtcaacctgcagatgacagtcaactagctgtt
gaagagtctggagaagaatcagatgaatccgattttattgtcgatgatgatggtcagcct
ctctcaaaaggcaaaaagaaaagacatatcaaatatactgattcagcattgcaagaagct
caggaaatttttggagttgattttgacttcgatatggttgatcaagaaggagatgaatat
gaagaagaaattgaggaagagtatgaagaagaagaggaggatgaggaaggaggagaggtt
caaccaagacctaaaaaaactcgtaagcgaatgccaaagaaaagtatatttgatgttttt
gaacccattgaacttgaaagaagtcatcttactgaccttgataatgaaataagagctgca
gatatacctgaaagatttcaactccgtaatgtgcctgtaactgaagcagcagatgatgaa
atagaagaggaagctgagtggatttacaaacaagcattcagtatacctactatctcaatc
caagaaggtgagcattcgggttctggacatcagcccattggtggacgtaaaaatacaagt
gctataggaaagataagggaagctttgaactttattcgaaatcagaagtttgaggtacca
tttatagctttctacagaaaggagtatgttgagccagatttaaatattaatgacttgtgg
actgtgtataaatgggatgagaagtggtgccagttaagagcgcggaagaagaatttgcaa
agactttttgaaaagatgcaacaatatcagtgtgatgaagtcatgtctgatcctgagaag
cctctatctgaaggactgagagctctggataatggtgatatatttaggctaacaaaagcc
cagacagtcgaagaagtgcaagattgctatttacatttcatgttatattatggacatgat
gtacctgccatgaaggaagcattaaagaaaaaagaaatgaaagaaaaggaattagaaggt
aaagaagtacctgaggaagagcaagaagttgaatctactaagattaaacacgtaccacac
aaagatgcttatgctgtatgcaaagaggcagggattgatggtttggccaaaaaatttggt
ctaacacccgaacagtttggagaaaatttgcgcgataactaccagagacatgaagtagat
caatatccagttgagcctaaagaagtagcctctgattacatttgcaagcgattttcaaca
ccagaagaatgtttatctgctgccaaattcatggttgctaatcagatatcaaaggaacct
gctgtgcgtaagtgtgttaggcaaacatacttcgaaagagcaaaaatatctgttcgtccc
acaaaaaaaggaattaaggaaatcgatgagaatcatccatgctacagcatgaagtatttg
aaaaataaaccagtaaaggacttaagaggagatcagtttttgaaacttactatggccgag
agagatggttttctaactataacaattgctatggataaacaaggtagcaatgatggacgt
catgtatttttagaagaaattaaacaactatacgaacgtgatgaattcagcaaaaatgtc
caagaatggaatgcacaaagacagcaggccctagaaatagcattaactaagcttctgtac
cctacatttcaaaaagaattgagattacgtctgctgaacgaagccaaagaaggagtaatc
aaggcatgctgtagaaaactgtataactggctgaaagtggctccatatcaagttgatccc
cagattgaagaagaggatgattttgatacaagatatggcactagagtgttagctattgcc
tattctcccacaagagaagtgcctgctttttctgctttagttgatggtgatggtgaagta
ttagaatttcttcggcttccatatttacttaaccggaggaatgcctggcgagaaaaagac
agaatattaaaggagaaagatttgaattccttaaaaaatctaattctttcaaagaagcct
catgttgtatgtgttgctgcagagtcaagggaggctttaatgattgttgatgatgtgaaa
atgatcattaatgacttgatggacagtgatcaatttcctccaatttctgtggaattaatg
gataatgaacttggagttttgtatatgaattctaaaaaaggggagtatgacttcagagat
taccctccacttttaaggcaagcaatctcacttgcacgtcgtttgcaagacccactcatg
gagttttcccaaatgtgtacacctgatgaagaaatattgtgtttgaaatatcatccatta
caggatgaattaaataaagaagatttgttgaatgcactgtatttagaatttgtaaacagg
actaatgaagttggtgtagattttaataaagctgttgagtttaatcacacagcaaatttg
gtgcaatttatctgtggtcttggccctagaaaaggtggatttttagttaaaactctaaaa
atatgtaataagcagttagaaagtagaacacaactagtaactgtttgtaagatgggacca
aaagttttcattaactgtgctggttttataaagattgatactgcttcccttggtgaaagt
actcagacatatcttgaagttttggatggatctcgtgttcatccagaagcttacgaatgg
gcccgaaaaatggctgtagatgctcttgaatatgatgatacttctgatgatgctaatcct
gctggagctttggatgaaattttagaaaatcctgaaaagttaaaggatttggatttagat
gcttttgcagaagaattggaaaggcaaggttatggaaataaaagtattactttgtatgac
atcagagcagaactgaatcataaatataaagatttaaggacaccatacagaccaccaaat
actgaagaagtgttcaatatgttaacaaaagaagttccagaaacattttacataggtaaa
cttattctggtggttgttactggtattgcccgtagaaagcctaaaaatgatcaacttgaa
aatgcaaatccaattcgaaatgatgacagtggtctgtggcaatgtccgttttgcttgaaa
aaagactttccagagctcagtgatgtctggagtcattttgatgatgcaagttgtccagga
caagcaatgggtgtacgtgttagacttgataatgggatttccgggttcataccaactaaa
atgatcagcgacaagcatgttataaatcctgaagatcgagttaaaattggattgactctt
catgccagaataaccaaaattgatattgaaagatttgctgtagatttgacttgcaggtca
tctgatctcagtgataagaataatgaatggagacctcccaaagatttatattatgattat
gaggcagaagagaaggatcataagatagaagatgctgctgcaaagcaacaaaatcggcaa
gtgtatttgaagagggttattgtccatccttcatttaaaaatgtaagctttaaagaagct
gaaaaaatacttgatacaatggaacaaggagaagtgatcattcgaccaagtagtaagggt
agcaatcatttgacagtgacgtggaaagttgctgatggtataaaccaacacatagatgta
agggaagaaggaaaggaaaatgaattcagtcttggtcattctttaattataggtgatgag
tcattcgaagatctggatgaaataattgcgagacatgtgcagcccatggctggttttgct
agagatctcttgaatttccggtattatgttgatgctgatggtggaaaaaaagaagagatg
gaaaagatattgtttgaagaaaagaagaaagttgcaaataaaattcattactatgtgtca
gcttcacgaatgtttcctggaaaattcttattatcatacttgcccagaaataaggttagg
catgaatttattactgtcttacctgaaggattacgttaccgcaaacgtgtctttcggtca
gtaaattctttgttcagatggtttaaagagcattttagggacccaatacctggaactcct
actgctatgtctgttcgcacaccaatgggacagtcttcttatataggaaacactcctagt
attaatcttgcaagtatgtttaaatcttattttttccatttgatcacttaa
DBGET
integrated database retrieval system
