KEGG   Stegodyphus dumicola: 118199980
Entry
118199980         CDS       T07385                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
sdm  Stegodyphus dumicola
Pathway
sdm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    118199980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdm03021]
    118199980
   03036 Chromosome and associated proteins [BR:sdm03036]
    118199980
Transcription machinery [BR:sdm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     118199980
   Coactivators
    SAGA/TFTC/STAGA complex
     118199980
Chromosome and associated proteins [BR:sdm03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     118199980
    STAGA complex
     118199980
    TFTC complex
     118199980
    SAGA complex
     118199980
    SLIK complex
     118199980
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 TFIID_NTD2 Beta-prop_WDR90_POC16_2nd ASA1 Beta-prop_EML Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_WDR75_1st CFAP251_N Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_EIPR1 NBCH_WD40 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_VPS8 PAC11 Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_Nup120_160 TRM82_WD SHKBP1_KCTD3_C Tricorn_2nd Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 118199980
NCBI-ProteinID: XP_035227776
LinkDB
Position
Unknown
AA seq 591 aa
MHHLLMRLVEMMNSGIIRFSRKNASLIESIVSKNGVQLTVGIKEMAVYSVVKSNSSIPCC
ITYFNERIDYHTADDEFRRFMDFIRKTSEPVKSQLTNFLYPVFVHIYLALFRDNKLSEAK
IFHEAYSDIFLSAEGYNDVISDLISFKTVSDILNHPHFSLFWEEKYIIQASEDTMEQLKS
YLKNVESTVLLPILHFHFYIEGDNEPQDLEYVTETIKDSVPVEVEQSRNEKLSALKNIIK
KVTEGPLSLPTSYAYTIECGAKNLSAIDVNSQNSLFACAFEDAKIHILSLTSDLLESEEA
TDDVSNIQLAFNKINRNIKSETENGRNRKPSYNKVLRGHVESVCGLSFTPDHDLLVSCSE
DCTIRAWNMKTFKNVALYYGHSSAIWDLDISSQTTYFATASKDCTARLWEFSHSSPLRIF
AGHSAAVDVIRFHPNNNYIATGSSDKTIRLWTTQDARAVRCFVGHNTYISSMAFSLNGQN
LATSDDDGCIIIWDLGTGMKIKELHGHTSRVLSLSFNGNSSMLASGGFDGTLKIWDVRNH
PSQRQESSDKEIKDPPSKPLASYDINNIIQFVRFNAKDLLTSFATSQRPVE
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgcatcatttgctaatgagactcgtagagatgatgaactctggtatcattcgcttttct
agaaagaatgcatctcttattgaaagtattgtttcaaaaaatggtgtacagctaacagta
ggtattaaagaaatggctgtctacagtgttgtgaaaagtaattcaagtattccatgctgt
ataacatattttaatgaacgtattgattatcatacggctgatgatgagttcagaagattt
atggatttcattcggaaaacttctgaacctgttaagagccagctaacaaatttcctgtat
cctgtgtttgttcatatatatcttgctttgtttagggataataagctttcagaagctaaa
attttccatgaagcctatagtgacatttttttaagtgcagaaggctacaatgatgtaatt
agtgacttaattagcttcaaaacagttagtgatatcctcaaccatcctcactttagtctt
ttttgggaagaaaaatatattatacaagcttcagaagatactatggaacaattaaaatca
tatctaaagaatgtagaaagtactgttttgctgcctattcttcatttccacttttatatt
gagggagacaatgaacctcaagatcttgaatatgttactgaaactataaaagattcagtg
ccagtggaagtagaacaatcacgaaatgaaaaattatctgcattgaaaaacataataaaa
aaggtaacagaaggtccattaagtcttcccacatcgtatgcttatacaattgaatgtggt
gcaaaaaatctttctgcaattgatgtgaattctcagaactcactttttgcttgtgcattt
gaagatgcaaaaattcatattctgagtttaacctctgacttgttggaatctgaagaagct
acagatgatgtttcaaacattcagttagcatttaataaaattaacaggaatattaaaagt
gaaactgaaaatggaagaaatagaaaaccaagttataataaagtacttcgaggtcatgtt
gaatcagtctgtggtttatcatttactcctgatcatgacttattagtttcttgttctgaa
gattgtactattagagcttggaatatgaagaccttcaaaaatgtggctttgtattatgga
catagctcagctatttgggatctagacataagttcacagacaacatattttgccacggct
tcaaaagactgtactgctcggctatgggaattttctcactcctctcctctgcggattttt
gctggacattctgcagctgttgatgttattagatttcatccaaataataattacatagct
actggttcctcagataagaccattcgactttggactacacaagatgcacgtgctgttaga
tgttttgttggccataatacatatataagttctatggccttttctttgaatggacaaaac
ttagcaacgtctgatgatgatggctgtattattatctgggatctgggtactggtatgaaa
attaaagagcttcatggtcatacaagtcgagtattaagcttgagcttcaatggaaacagt
tctatgttggcatctggtggttttgatggaacattgaaaatctgggatgttcgaaatcac
ccttctcaaagacaggaatcctctgacaaagagataaaggacccaccctcaaaacctctt
gcatcatatgatattaataatattatacaatttgtacgttttaatgcgaaagatctatta
acatcatttgctacttcacaaagacctgtggaatga

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