KEGG   Stegodyphus dumicola: 118201043
Entry
118201043         CDS       T07385                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
sdm  Stegodyphus dumicola
Pathway
sdm03030  DNA replication
sdm03410  Base excision repair
sdm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    118201043
   03410 Base excision repair
    118201043
   03420 Nucleotide excision repair
    118201043
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sdm03032]
    118201043
   03400 DNA repair and recombination proteins [BR:sdm03400]
    118201043
Enzymes [BR:sdm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     118201043
DNA replication proteins [BR:sdm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    118201043
DNA repair and recombination proteins [BR:sdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      118201043
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE RNase_H_2 DNA_pol_B_exo2 APP_N CCDC93_N
Other DBs
NCBI-GeneID: 118201043
NCBI-ProteinID: XP_035228955
LinkDB
Position
Unknown
AA seq 2251 aa
MVLMNSGRFKRDPLASGESSSIKVEDTSERRLQQSLFNDEIDAKFGFVRYKESAERKAWL
FNMHSTEILDDDKRLISAVDFYFVEDDGSKFKATLPYKPYFYVSTNKGAEQEVASYLNKK
YGGTISKVEVVLKEDLDLPNHLSGLKGKFVKLMFSTVSDLMKVRKEIMPHVKKNREKQKN
SVSFHEVLEQNTEVATSKKHFEQIDSIIDIREYDVPFHVRVSIDLKIFVGHWYFVRGKGN
NPPEIKLCNELLQPVDVIVLAYDIETTKLPLKFPDMATDQIMMISYMIDGQGFLITNREI
VSSDVDDFEYTPKPEFEGNFTVFNEANEEQLIQKFFDHILEVKPLVFVTYNGDNFDFKFV
EARAAVYQLDMLKEIGFSTSRDGYYLSRPCVHLDCLHWVKRDSYLPVGSHNLKAVAKAKL
RYDPVELDPEEMCLMAAEQPQVLASYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEV
LRKGSGTLCESLLMVKAYHANIIFPNKQESVLNKLTEDGHVLDQETYVGGHVESLEAGIF
RANLPCRFRLVPEALQKLMGDVERTLKHVIEVEENVPIDQVLNLEEVKEEIIEKLKKLRD
CPSRLENPIIYHLDVGAMYPNIILTNRLQPSAMVDETTCAACDFNKPDAQCRRAMPWTWR
GEIMPASRGEFQRIQQQLEIETFPSSEVKGKMIPFHELSKEEQCAIEKKRLTDYCRKAYK
KTHATRVEVRNSTICQRENSFYVDTVRAFRDRRYEFKGLLKVAKKKVAEAVAKGDASAIK
SSKTLEVLYDSLQLAHKCILNSFYGYVMRRGARWYSMEMAGIVCHTGAGIITKAREIVEQ
IGRPLELDTDGIWCILPSSFPENFTIKTSNPKKPKLHISYPGAMLNVMVKDHNTNDQYHE
LIDPENHVYEIRSENSIFFEVDGPYLAMVLPASKEEGKRLKKRYAVFNFDGSLAELKGFE
VKRRGELQLIKIFQSSVFEAFLKGNTLEECYAAVAKVAEYWLDVLYSKAANMPDKELFDL
ISENRSMSRKLEEYGVQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGCPVTER
AIPLAIFQAEPSVKKHYLRKWLKSPSLSDFDIRSILDWEYYIERFGSAVQKIITIPAALQ
QVPNPVPRVAHPDWLHKRLLEKNDTLKQKKITEIFSHKAKPTNEESYGEQVIDIEDQIQP
STSAVGVPVCSKRKATSEAKNSKASKKRNTLSDSDLSKTWLEYLGPPPPLGKTRPEIVNW
LKYQKKKWAFQIQQRKSLSARKFSKESSAIKPVSGVDRNRVGIGQFLRKAKRTLLDSPWQ
IIQISETGQLGIYKLWVLIENDLHSVKLNIPRIFYVNQLNSKLGESDLWKRVNRILPRCH
PVYNLYEYTVDEQIYQQHCNDLLAELSLPHIEGVYETQLPLVFRALIELGCVCAVSRKFV
RHYASSDTDTYHLRHLEFRTLAGHNYLEAGALKLLYLYHHSCGQKSMFGFFFPPSKRAVI
YVLDTVKTNQMPNLGNIFAAERNAKLASGTDIKLLPESDYQFEIHIEKDIKQVYRGLQKN
LMLYKDEKRGPTAVVIQSPKTAEDICLLMPVFSEFPIIPIHIHDSDTLYQVMDWQRVGSK
AMIKHFMNVDSTITVLLEQCRYFHVPIGNLPQDVTMFGSDIFFARHLQKQNFILWCSPTE
RPDLGGKEADDNRLLAESETTLAEVSKSDAYPSVCLEILVDGIPVSTVLEAQNLMEMEGT
SSSIAFDCGPSSSLADMMTGGANPAPLGVYDESAVCAGAFRVLRTMVTGWVHDVLEYKNV
FADNQIINFYRWLRCRQALLYEPAIKQILDNLMKKMFTQLIHEYQKLGAIVLYASYNRFI
ICTKRKNVDDAIAYAQYVNQCIRNKEIFHCLQFEVEACWEYLLWLDTANYGGVKIKHDAL
GEQSNEVRADDDNKVESSDNQSNENDNRTLTLCFHIANFLPQVAAIKENFYNVVAEYIQE
AYTYYKEQENSLMTTVEPSQEPEQSEDSEDNSTELMKYVRSNLAHKLYILVEKIKKKLPS
GTLPNGQNVFPVVPGSYLKLTNPSLEFTKAVCKVLSLDSRLADVVLKLRRDLLRIVGVKE
FSDEAEWKDPCLSFMLAEVICKVCFSCNNIDLCRDRYMINEATGSPLWMCDICKSPYDIK
EIESMMIECIHKKSMAHILQDLQCMKCKMIKDRNMTRFCSCAGRFDTLLPINDLSQTLAT
FKNISDHFQMKKLKDIVLWVEKMNPQIKLQS
NT seq 6756 nt   +upstreamnt  +downstreamnt
atggtgttgatgaattcaggacgttttaaacgcgatccactggcttctggtgaatcatca
tctataaaagtagaagatacaagtgaaagacgtttacagcagtcacttttcaatgacgaa
atcgatgccaagtttggtttcgttcgttacaaagaaagtgcagaaagaaaagcttggtta
ttcaacatgcactcaactgaaatattagatgatgataaaagactaattagtgctgttgac
ttttattttgtagaagatgatggcagtaaattcaaggctactttgccatacaagccttat
ttttatgtttcaaccaataaaggtgctgaacaagaagtagcatcttacttaaataaaaag
tacggcggtaccattagtaaagttgaagttgttcttaaagaggatcttgatcttccaaat
catctttctggattaaaaggaaaatttgtaaaactaatgttttccactgtatcggacttg
atgaaagtaagaaaagagattatgcctcatgtgaaaaagaatagagaaaaacaaaaaaat
tcagtatcatttcatgaagtgctggagcaaaatacagaagtagctacatctaagaaacat
tttgaacaaattgatagcatcattgatattcgagagtatgacgttcctttccatgtgcgt
gtgtctatagacttaaaaatttttgttgggcattggtattttgtaagaggcaaaggtaat
aatccaccagaaattaaattatgcaatgaattgttacagcctgtagatgtaattgtactt
gcgtatgatattgaaacaacaaaattaccgttaaaattccctgatatggccactgatcag
attatgatgatatcatatatgattgatggccaaggatttttaataaccaacagggaaatc
gtatcttctgatgtagacgactttgaatatacaccaaaaccagaatttgaaggtaatttt
acagtttttaatgaagctaatgaagagcagttaattcaaaaatttttcgatcatatactg
gaggtgaagccattagtttttgtaacttataatggagataattttgattttaaatttgta
gaagctagggctgctgtttatcagttggatatgttgaaagaaattggtttttcaacgagt
cgtgatggatattatttatcaagaccctgtgttcacctagattgtctgcattgggtaaaa
cgtgacagttatttaccagttgggagtcataatttaaaagcagtagctaaagccaaattg
agatatgatcccgtggagttagatccagaggagatgtgtctcatggctgcagaacagcct
caagtattagctagttattcagtttctgatgctgttgctacttattatttgtatatgaaa
tatgtacatccctttatatttgctttgtgtacaattattccaatggaacctgatgaagta
ctcagaaaaggatctggcactttgtgtgaatctttgcttatggttaaagcatatcatgca
aatatcatatttcctaataagcaggaaagtgtattaaacaaattaactgaagatggccat
gtattggatcaagaaacatatgttggaggacatgtggaatcccttgaagctggaattttt
agagccaatttgccctgtagatttagattggtacccgaagctcttcagaaactcatggga
gatgttgaaaggactttaaaacatgtcatagaagttgaggaaaatgttccaattgatcaa
gttttaaatttagaagaagtaaaagaggaaataattgaaaaactgaaaaaactacgtgat
tgcccttctagattggagaatccaataatttaccatttagatgttggggccatgtatccc
aatatcattctgacaaacagacttcagccttctgcaatggtagatgagactacatgtgca
gcttgtgattttaataaaccagatgcccagtgtagaagagccatgccatggacttggcga
ggtgaaataatgcctgcctcgcggggagaatttcagcgcattcaacagcaacttgaaata
gagacatttccttcctctgaagttaaaggtaaaatgattccattccacgagctcagtaag
gaagagcagtgtgctattgagaagaaacggcttactgattattgccgaaaagcttataag
aaaacacatgctactcgtgtagaagttcggaactcaactatttgtcaacgagaaaattct
ttttatgttgacactgtgagagcatttagagaccgtcgatatgaatttaaaggcctttta
aaagttgctaaaaagaaagtagctgaggctgttgcaaaaggagatgcatctgcaataaaa
tcatctaaaactcttgaagttctgtatgattccttgcagctagctcataaatgtatctta
aattctttttatggatatgtgatgagaagaggagctcgttggtatagtatggaaatggca
ggtattgtgtgtcatactggtgctggaatcatcactaaagctcgtgagatagtagaacag
attggtcgacctttagagttagatactgatggtatttggtgtattttgccttcatccttc
cctgaaaatttcactattaaaacaagtaaccccaaaaaacccaaactccacatttcatat
ccaggtgcgatgttaaacgtgatggtcaaagatcataatacaaatgatcagtatcatgaa
ctaatagatcccgaaaaccatgtttatgaaatccgcagtgagaattcaattttctttgaa
gtagatggaccatatttggcaatggtgttgcctgcatccaaagaagaaggtaagaggttg
aagaaacgatatgctgtatttaattttgatggttctttagcagaactcaaaggttttgaa
gtcaaaaggagaggagaactgcagctaattaaaatatttcaatcttctgtttttgaggca
tttttgaaaggaaacactcttgaagaatgttatgcagcagtagctaaagttgctgaatat
tggctagatgttttatactctaaagcagcaaatatgcccgataaggaattattcgattta
atatcggaaaatcgtagtatgtctcgtaaacttgaagaatatggagtacaaaaatcaact
tctataagtacagcaaagcgattagcggaatttcttggtgatcagatggttaaagatgct
ggtcttagttgccgttttattatttccaagaaacctgaaggctgtccagtgacagaacga
gcaattcctcttgcaatattccaagctgagcctagtgtgaaaaagcactatttaagaaaa
tggttaaaatctccttctttgtcagattttgatatacgctctattttagactgggagtat
tatatagaacgttttggaagtgctgtacaaaaaattattacaattcctgctgccttacag
caggttcctaaccctgttcctcgggttgctcatcctgattggctgcacaaacgactttta
gaaaaaaatgatactttgaagcagaagaaaataactgaaatattttcgcataaagcaaag
ccaactaatgaagaatcgtatggggagcaagttatagatattgaagatcaaattcagcct
tcaacttctgcagttggggttcctgtttgttctaaacgcaaagcaacatcggaagctaaa
aatagcaaagcttcaaaaaagagaaatactctcagtgattcagatttaagtaagacttgg
ctggaataccttggacctccacctccacttggaaaaaccagacctgaaattgttaattgg
ttaaaataccagaaaaagaaatgggcatttcaaatacaacagaggaaaagtctgtcagct
aggaagtttagtaaggaatcatcagctattaaacctgtttcaggtgttgatagaaatcga
gtgggaataggtcagtttctgagaaaagctaaaagaactttactagatagtccatggcaa
attatacagatttctgaaactggtcagttaggcatttataaactatgggttttaattgag
aatgatttacatagtgtcaaattaaacattcctagaatattttatgttaatcaacttaat
tcaaagctaggtgaaagtgatttatggaaaagagtaaacagaattttgcctcggtgtcat
cctgtttataatttatatgagtacactgtggacgaacaaatttatcagcagcattgtaat
gatttgctggctgaactgtctttacctcatattgaaggtgtatatgaaacacaacttcca
cttgtatttagagctctaattgaattagggtgtgtttgtgcagtcagtcgtaagtttgtc
aggcattatgcctcctctgataccgatacttaccatcttcgccatttggagtttcgtact
ctagctggacataattatttagaagctggagctttaaaattattatatttatatcaccat
tcttgtgggcaaaaatctatgtttggattcttttttcctccttccaagcgagctgtcatt
tatgttttagatactgtcaaaacaaaccaaatgcctaatttgggaaatatattcgcagcc
gaacgtaatgccaaacttgcaagtggaactgatattaaacttttacctgaatctgattac
caatttgaaattcatatagaaaaagatattaaacaagtgtatcgtggtttgcagaagaat
ttaatgttgtataaagatgagaaacgagggccaacagctgttgttattcagtctcccaaa
actgctgaagatatatgtttgttaatgcccgttttttcagaatttccaattattccaatt
catattcatgacagtgatacactctatcaagttatggattggcaacgagtaggttctaaa
gctatgatcaaacattttatgaatgtagattcaactataactgttcttcttgaacagtgt
cgttattttcatgtgcctattggaaatttgccacaagatgtaactatgtttggaagtgat
atcttttttgctcgacatttgcaaaagcaaaatttcattctttggtgctcaccaacagaa
agacctgatttaggtggaaaagaagcagatgacaataggcttttggctgagtcagagact
actcttgcagaagtgagcaaaagtgatgcctatcctagtgtttgcttggaaattttggta
gatggtatccctgtttcaactgtactggaagctcaaaatttaatggagatggaaggtacg
agctccagcatagcatttgattgtggtccttcctcctcattggcagatatgatgacaggt
ggtgcaaacccagcacctttaggtgtatatgatgaaagtgctgtctgtgcaggtgcattt
cgagtcctccgaactatggttactggatgggttcatgatgtattagagtataaaaatgtt
tttgcagataaccagattatcaatttctataggtggttaagatgccgccaggctttgtta
tatgaaccagctatcaaacagatattagataatctcatgaaaaaaatgtttacacaacta
attcacgaatatcaaaagttaggtgctattgtgttatatgcatcttacaatcgattcatt
atatgcacaaaacgaaaaaatgttgatgatgcaatagcctatgctcagtatgttaatcag
tgtatcaggaacaaggaaattttccactgcttgcagttcgaagtagaggcttgctgggaa
tacttattgtggttagatactgcaaactatgggggtgttaaaataaaacatgatgcattg
ggtgaacagtcaaatgaagttagagcagatgacgataacaaagtagaaagttcagataac
caaagtaatgaaaacgataaccgtacccttacattatgctttcatattgcaaattttcta
cctcaagtggctgctattaaggaaaatttttataacgttgtggctgagtacattcaagag
gcatatacttattataaggagcaagaaaattcattaatgactactgtagaaccaagtcag
gagccagaacaaagcgaagattctgaagacaattctacagaacttatgaaatatgtgaga
agcaatcttgcccataaactttatattttagtagaaaaaattaagaaaaagttaccatct
ggtactctaccaaatggtcaaaatgtatttcctgttgtacctggttcttatctaaagtta
acaaatccttctttagaattcaccaaagctgtgtgcaaggtattatctttagatagtcgt
ttagctgatgttgtcttgaaattacgtcgagatcttttgaggattgttggagttaaggaa
tttagtgatgaagctgaatggaaagacccttgtctttcttttatgcttgcagaagtcata
tgtaaagtgtgttttagctgtaataatattgatttatgcagagatcggtatatgattaat
gaggctacaggttctcctctctggatgtgcgacatttgtaaatcaccatatgacattaaa
gagatagagagtatgatgatagaatgtattcataagaaatccatggcacatattttgcaa
gatctccaatgcatgaagtgcaagatgattaaagacaggaatatgacaaggttttgttca
tgtgctggcagatttgatactttgctgcctataaatgatttgagtcaaactcttgctaca
tttaaaaacatttcagaccattttcagatgaaaaaactgaaagacattgttttgtgggta
gaaaaaatgaatcctcaaataaaacttcagagttaa

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