Stegodyphus dumicola: 118201053
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Entry
118201053 CDS
T07385
Name
(RefSeq) THO complex subunit 4-A-like
KO
K12881
THO complex subunit 4
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03013
Nucleocytoplasmic transport
sdm03015
mRNA surveillance pathway
sdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118201053
09122 Translation
03013 Nucleocytoplasmic transport
118201053
03015 mRNA surveillance pathway
118201053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdm03019
]
118201053
03041 Spliceosome [BR:
sdm03041
]
118201053
Messenger RNA biogenesis [BR:
sdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118201053
TREX complex
118201053
Spliceosome [BR:
sdm03041
]
Complex C
Other components
EJC/TREX
118201053
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118201053
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
DUF8229
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
118201053
NCBI-ProteinID:
XP_035228967
LinkDB
All DBs
Position
Unknown
AA seq
225 aa
AA seq
DB search
MSDKLDMSLDDIIKQSKGQFRLRGRGGGRGRGSRGRTRGSFAGNPIRPRTNRGRSRPLPY
SRPKEIPDRWQHDLFDGGVSQRAGLTTGVTKLLVSNLDYGVSDGDIKELFAEFGPLRKAA
VHYDRSGRSLGTADVIFERRLDAVKAMKQYNGVPLDGRPMNIQIASSTIPSPNRGRSGNS
QRNFNRGRQSGSSRGRQGGRGGAPRKVPTAEELDAELDAYVNKME
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaattggatatgtctctagatgatataattaaacaaagtaaaggccaattc
agattaagagggcgaggaggaggaaggggccgaggatcaagaggccgaacgcgtggtagt
tttgccggcaatccaatacgacctagaacaaacagaggccgttctcgacctctgccgtat
tcaagaccaaaagagataccagatagatggcagcatgatctgtttgatggcggagtcagt
cagcgagctggccttacaacaggtgttacaaagcttttagtatctaacttagattatgga
gtttcagatggtgatataaaggaactttttgctgaatttggtcctttaagaaaggctgca
gtacattatgacagatctggaaggtcattaggaactgcagatgtgatctttgaaaggcga
ttagatgctgttaaagcaatgaagcagtataatggagtgcctctagatggtaggcctatg
aacattcagattgcaagctctaccattcctagtccaaacagaggaagaagtggaaacagt
caaaggaactttaacaggggtcgtcaaagtggaagctcacggggtaggcaaggagggaga
ggtggagctccacgaaaagtgcccacagcagaagaactggatgctgaattagatgcatat
gtaaataaaatggaatga
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