Stegodyphus dumicola: 118201431
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Entry
118201431 CDS
T07385
Name
(RefSeq) RNA-dependent RNA polymerase 1-like isoform X1
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
sdm
Stegodyphus dumicola
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdm03036
]
118201431
Enzymes [BR:
sdm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
118201431
Chromosome and associated proteins [BR:
sdm03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
118201431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RdRP
Motif
Other DBs
NCBI-GeneID:
118201431
NCBI-ProteinID:
XP_035229431
LinkDB
All DBs
Position
Unknown
AA seq
1429 aa
AA seq
DB search
MFIKDFVPNTELTKEDTNNKSLYKFQKENAMFHQEYLYNIYCRIQIERDINTDYSRLVKL
FSSFRKGYILGSELWLKHELMYMIDSSIETVDKYFILDKFELGNFVGLMNFVSRFDSGST
LQQHGFKVTQIKVKFLHDYKRLELYFVVGESHLKVKKRSAKSHRLYKLTIHYNAFHSVIV
SRRDGFVAYFRMLQAPLIYAVEQDEEDESYISYQDLHSGTGWFRAVDLFKRCPSNMKKEF
SMNTVLGLNFATENYDLLVQLVNHNKNMKVYFAPVNVVSSENSVPLFHINNFECFYAFQC
LLSRSFEAADQLILRKELDQFKSFVLEKSEENSEALSEALYQLYYSFNKGNVVILMHSLP
ILYDKFVNQISLVTTQNKGNLINTENQQNNLLLIKRAICMPTHVMFLPPQPTLKSRALRS
CNPDFSLRISIRDTNLETINMTLAHGPVANKKVQLREFFKEHFKTPLLKGIKVGKRCYNY
VGSSTSQLRAHGLWFYACDNEGRTADKIRKEFGDIDKIKQVPKFMARMGQTFSQAMVNIT
VPQEYTNVDCPEDDVKWGIVKYLTDNLDIEEDRPEKFLVELSVNEREESKEEVEQYTFSD
GVGRISLEIAEEVYKKLDIEDKKPSAMQIRYAGCKGMLVIDPRLEGKKIFFRESMKKFSS
KNDSLEILKLSEKRTAYLNRPLITILEQLGIEKEVFLKLQKKMIQNHIKSMFHETEAWCF
LHRNSLLRLDFLKLHISGIRFTEDPLFRSMIYALFRKQIELLKTKANIEIPVDQGRVMFG
VMDETFTLEYGQVFVQYSDWDTDEPRILEGTVVVTKNPCMHPGDVRKFEAVDVEALHHIR
DCIVFPAKGHRPHPDEMAGSDLDGDEYHVMWLKDLIFPSDNKEPMHYAVRKDKTQDRKTP
ITPADELDHLCEYIMNDKVGLVANAHLAFADYLNEGIFSKTCLHIAKLYSLCLDFPKSGK
AVPNTKDVKVSKYPDFMEKLQQKDSYLSKKALGFLYRNCKRLELGLENEKHEIDYRLDQD
LKHQSWKNYEKNAVRMLKKYSRKIEHLLQIYSFENEGELLSGAILNPPHHLENRHDLNNL
VALLEFEIPRMFRSFQNQFFSEFGGKPKDNFTDKMFQKASAWYMVTYSSSTKNSSHFFGL
PWAVADVLIALKIKNKKCSQEEYKKYNSKSLLEEIVDKSVAKHLPELTENCEDLYIYEAR
YDLLDVAYNILKKWLENQKEYFSDYDLKEFQKYISKEFGVVTSELLNCDVSYIKRLKKRK
DIKKAISPCYYVIEALLKISEKGSQCFENTCSITQQELALVSWITLIKLACTYNPQYLGI
PDEKGHYADMVFYSPQDGIIDTIQLPLFDKHNKQNMKFSKKIVQDETAVIDYLKQQTNLR
EITYRYVRLNDARYYVKFTVKGTRFAIEKLKDIVVLDNFYQSVIKNSEL
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtttattaaagattttgtcccaaatactgaacttacaaaagaagatacaaacaataaa
tctttgtacaagtttcaaaaggaaaatgctatgtttcatcaagaatatttgtataatata
tattgcagaattcagattgaaagagacattaatactgattatagtcggttagtaaaactc
tttagttcttttcggaaaggatatattttgggatcagaattatggttgaaacatgagtta
atgtatatgattgacagtagtatagagacagtcgataaatattttatattagataaattt
gagcttggaaattttgttggattgatgaattttgtatctcgttttgatagtggaagtaca
ttacagcagcacggttttaaagtaacccaaatcaaagtcaagtttctacatgattataaa
agattagaactttactttgttgttggtgaatctcatttgaaagttaaaaagcgaagtgct
aaatctcatcggttatataaattaacaatccattacaatgcctttcattcagtaatagtg
tcaagaagagatggatttgtagcctatttccgtatgttgcaggctcctctaatctatgca
gttgaacaggatgaggaggatgaaagttacatttcatatcaagatctgcattctggaact
ggatggttccgtgcagttgatctgttcaaaagatgtccatcaaacatgaagaaagaattt
agtatgaatactgttctaggcttaaactttgccactgaaaattacgatttattggtgcag
ctagtaaaccataacaaaaatatgaaagtttatttcgctcctgtaaatgttgtgtcaagt
gaaaattcagtgcctttgtttcacataaataattttgaatgtttctatgcattccagtgc
cttttatctcgcagctttgaagctgcagatcagttaatattacgaaaagaactagatcag
tttaaaagttttgtactggaaaaaagcgaagaaaattcagaagcattatctgaagcactt
tatcagttatattactcatttaataaaggaaatgttgtaatattaatgcattctcttcca
attttgtatgacaagtttgtaaatcaaatttctctagtaactactcaaaataaaggaaac
cttattaatactgaaaatcaacaaaataatttgttgttaataaaacgagctatatgtatg
ccaacacacgtaatgtttttgcctccacaacctacattaaaaagtcgtgctttacggagt
tgtaatccagacttctcattgcgaatttccattagggataccaatttagagacaataaat
atgacattggctcatggtccagttgctaataaaaaagtgcaattaagggaatttttcaaa
gaacattttaaaactcctttattaaaaggcattaaagttggtaaacgatgttataattac
gttggaagttccactagtcaattgagagcccacggtttgtggttttatgcttgtgataat
gagggaagaacagctgataaaattcgtaaggaatttggtgatatagataaaatcaaacaa
gtccctaagtttatggctaggatgggacagacattttctcaggctatggtaaacataaca
gttcctcaagaatatacaaatgttgactgtccagaagatgatgttaaatggggaatagtg
aagtatcttacagataatttagacattgaagaggatagaccagaaaaatttcttgtagag
ctgtcagtcaatgagcgagaagaaagtaaagaagaagttgaacaatatactttttccgat
ggtgttgggcgtatatcattggaaattgcagaagaagtttataaaaagttagatattgaa
gataaaaaaccttctgctatgcaaataagatatgctggatgtaaaggcatgcttgttatt
gatcctaggcttgaaggtaaaaaaatatttttccgtgagagcatgaagaaattttcttca
aaaaatgattcattagaaatattgaaattaagtgaaaaacgtactgcatacctgaatagg
cctttgattactattctggaacagttaggtattgaaaaagaagtattcctcaaactgcag
aaaaaaatgattcagaatcatattaaaagcatgtttcatgaaacagaagcatggtgtttt
ttacataggaattcgctgctacgattggattttctaaaactgcatatatcgggcattcgt
tttacagaggaccctttatttagatcaatgatttatgcactcttcagaaagcaaatagaa
ttactgaaaacaaaagcaaacattgaaattcctgttgatcaaggtcgtgtaatgtttggt
gttatggatgaaactttcactttagaatatggtcaagtttttgttcagtatagtgattgg
gatactgatgagccaagaattttggaaggaactgtagtagtaacaaaaaatccttgcatg
catcctggagatgttcgcaagtttgaagcagttgatgttgaagctttacatcatattcgt
gactgtatagtttttcctgctaaaggtcatagaccacatcctgatgaaatggctggttct
gatttggatggtgatgaatatcatgtaatgtggctcaaggacttgatctttccatctgat
aacaaagaaccaatgcattatgcagttcgaaaagataagacacaggatcgtaaaactcct
attacacctgcggatgaattggatcatttgtgtgaatacattatgaatgataaagttggc
cttgttgcaaatgctcatctagcctttgcagattacctgaatgaaggcatttttagtaaa
acttgcctgcatatagccaaactttattccttgtgtctagactttccaaaatctggtaaa
gcagtaccgaatactaaggatgtcaaagtttctaaatatcctgattttatggaaaaatta
caacaaaaagactcctacttatcaaaaaaggcccttggttttttgtatcgaaattgcaaa
cgtttggaattaggactggaaaatgaaaagcatgaaattgactataggcttgatcaagat
ttaaagcatcagtcatggaaaaattacgaaaaaaatgctgtaagaatgttaaaaaaatat
tcaagaaaaatagagcatttgttacaaatatattcatttgaaaatgaaggagaactgctt
tctggtgcaattttaaatcctccacaccatcttgaaaatagacatgatttaaataactta
gtagctcttttggaatttgaaataccacgaatgttccgaagctttcagaatcaatttttt
tcagagtttggtggcaaaccaaaagataattttacggataagatgtttcaaaaggccagt
gcttggtacatggttacttatagtagttcaaccaaaaatagttctcatttctttggcttg
ccatgggcagtagctgatgtattaattgcattgaaaattaaaaacaaaaagtgcagtcaa
gaagaatataaaaaatataactcaaaatcccttcttgaagaaattgtagataaaagtgtt
gcaaagcatttgcctgagcttactgagaattgtgaagatttgtatatttatgaagctaga
tatgatttattagatgttgcttataatatattgaaaaaatggctggaaaaccaaaaagaa
tacttttcggattacgatttgaaagaatttcaaaaatatataagcaaagaatttggagta
gttacttctgaattacttaattgtgacgttagttatattaaaagattaaagaaaaggaaa
gacattaaaaaagcaatatctccttgttactatgtaattgaagctttgcttaaaatatca
gagaaaggtagtcagtgtttcgaaaacacttgttcaatcacacaacaagaactagctttg
gtttcttggattactcttataaaattagcttgcacatacaatccacagtatttaggaatt
ccagatgaaaaggggcattatgctgatatggtattttattctcctcaagatggaattatt
gatactattcagcttcctttatttgataaacataataaacaaaatatgaaattcagtaag
aaaattgttcaggatgaaacagctgtgatagattatttaaagcagcagacaaacctacga
gaaattacatataggtatgtgaggcttaatgatgctcggtattatgtaaaatttacagta
aaaggtacaagatttgcaattgaaaagctgaaagacattgtggttttagataatttctat
caaagtgttattaaaaactctgaattgtaa
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