Stegodyphus dumicola: 118201782
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Entry
118201782 CDS
T07385
Name
(RefSeq) serine/threonine-protein kinase SMG1-like
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118201782
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sdm01001
]
118201782
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdm03019
]
118201782
Enzymes [BR:
sdm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118201782
Protein kinases [BR:
sdm01001
]
Serine/threonine kinases: Other
PIKK family [OT]
118201782
Messenger RNA biogenesis [BR:
sdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
118201782
mRNA cycle factors
Common to processing body (P body) and stress granule
118201782
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMG1
PI3_PI4_kinase
FRB_dom
RVT_1
HEAT_ATR
HEAT
Motif
Other DBs
NCBI-GeneID:
118201782
NCBI-ProteinID:
XP_035229827
LinkDB
All DBs
Position
Unknown
AA seq
2882 aa
AA seq
DB search
MNQRFFSRNKEPRREKLIRTRRDDDERVHGDEPPTRRSSSERPNSAHASSYSRYKDNFVE
KPRSTSRDSQGSLVFRRQERGKLQSNFSKSSSGEISPCRVSHADTMRNESAGRLSYSSHY
NRATNSRERDFASKRSGHLDNCHVIDENRLKTILHRLLRDEDRERQATLIRQLRMIFEHS
ENYKIIQANREEIISTFEDFIQLGLNSELKQEFVSAVGTLGAILGLKAKSLLDWEFAVIS
MSKSDDIRILILKTVLEMLKIDAEKRNLAEHVPFVMARLQSALEVADVPELLIAIVNVIF
EISNGYPTVFSKHFSDTVDILIGWHIDATQQQSVIEFTSNTLIGFQQFWISDINFTATLL
GQFLEDMESYAEGLPKIKPQPKKSVMFLKELAQSKLNSSGSVESQLCSPEENVAKIKSLI
RVLITVLKSIEDLIVPDESGPISWGFVVQMLKSFLKYIKITMEYHYYCDLMTSANECLDL
LLKLAQLHSKDALDELMSFVDLLQEKKSNPLSESHLVSILRMMIRFVKTVGTYLPVKFVT
KLFSPTSLSRQLRLSPSSKIQKLLIELYHIVLAVKNVQIVEEFYKCIMNDIVDAHNALLK
SSEENSICSYYSEVSLLLSICALVEIGNIKHSLIRMFALKPSFFDLMIIQLKPTSPELAK
RFPALQSAILYTLYSHCQRHSHFVNSSALVNPNAASGSPVSTSGNTSPIMTDVPPTSPSS
GNLEKVIKLLIDLLDGPHNSYDSRLLAAKWSVEILENVQRHLVRLILNTCFEDLLNATLN
AGFSYDPSVCKIACKGLHIFLKSTSSVLPETTLQRCYDLCILKLSSHDIEVQEQFAYLLS
LLPLDIVLMGSTANVFKGGSTHSAAKDVDSSLKLYMSVHDVWSVYRGYMGRSCPGNFFSH
HFRTITNYVLQGKEPHEKKWLLKLFHSCPPPERHSRIDFLMSYLANNSLAVLWFWAVWEV
AQSCVISKLRTPLGKPQETFMAIEGALKSAAKFSKNKEDNFSSESKHLTLLRVNLLLSLM
EHLEKLMYNAYEGCAAALPSPPKNVRTFFRTNKSTCHEWLSRIRSTAVVVAVNAGNPAAA
VRHGFELLQEIKNSGNSQVPEFENTLYAVVKALIQMHCPEAVLGLYVWCKESFNRKLTWI
KASVDCAAGRLVPMKFVNSGLTFCEYVCCYPEVPEGSRDRNLQGRQIEQMIEDHCLCLLD
NGQNIYFHESTRTFHALDLALCSPSLLPFCTFSVGNYLYDGDLFSHFGSLYVDDLQISCQ
GVDMRYVERQLQIALNRIQKWSNGEGFIFSKEKTRLLVCGRLDCGSIAYGSAQPSVLVKL
NPHTSSGSEDQFENAAHEYLCILQSLSEKNKLNMSESGINKPQVDIYLHSFLINQVIDCY
MNLGNWSDAAKWAEFLEKVKFNQNGLSVSIPWSCNNVTYLRCLTSFDEVSSIGTKKDLAA
YFHDLSVISESNANSSWTMEEQFAKTQQLLMSVALEHENSNKSSVQLKKLTDEINEAKDE
VLKLIKLSALTWPPCIEPKHAALFISASTLQFSKKTNSTFLRDNIKLDASDCYSSTLGFL
LTWENIWHHLNSASPTAKLQGGFFDLLMITARLARKQQNYKMCSKLITKAASYVCKTAQN
SDLIDSPLSGDDDDAKDVNFLKKMLRSTFSGNPSEKLLKMQREGAKLLHCLGENDCSHEL
LLHSVTVISNYLKDSNNQLSSVTIDQLSELNSRSMLNLVKYVQQDTKSLNSSSHDNSWLL
LLYNSINDLKCSGEISGIPKNFIIDLPQENVVSDLDYLIGQLLQLSIYQCPSLAKSWCNF
ASWCYGWGRKVVNTSSNGSVFIYPEEEAKIISLMPNALKEDIDILLGIITSLNSSSGGEW
DNQEMDYTENGAEEIRWQILTTCPFLLKVEDSETVIENIIDIWKGLVTRAYSYYRLAAMS
YLQYLQLNGKSPNEEKSDDDNVTATLRLLRLVVKHASELRDVLEDGLAETPTAPWRGIIP
QLFSRLNHPEPYVRQSISDLLCRVAQAAPHLIVFPAVVGSLTLKVGPQLQEEAAGLFGAY
FSDSIEDNPTSQADGSQVSDRDELQQPVVMLSDDEDSEEDRQKTAVMQNCFHALVETLGS
QDERTISEAKNLIHELHRITLLWDELWLGTLNMHQSEVNRRFSNLEKEICKVMNNTYLSK
EEKKEIVKEKHNVYVKPTLFLLEQLQKITTQPPETPHEQWFQKTFEKPIENALNKLRNPS
DPSRPQESWSVFKQLYQLLQQKVQQQSRSHLSMDQISPVLASLKSTVIPMPGINKASGVI
TVQSVHNIVSILPTKTKPKKLAFIGSDGQRYTYLFKGLEDLHLDERIMQFLSIVNNMFSR
SKRHGKEVYYARHYSVTPLGPRSGLIQWVDGATPLFGLYKRWQQREANSAAVKGQNSSGN
VGVVLRPSEIYYNKLTPLLKEKNLNCLDNRKEWPLSVLLEVLNQLMEETPNNLLAKELWC
SCSSALEWWNVTQTYNHSTAVMSIIGYIIGLGDRHLDNVLVDLSTGEVVHIDYNVCFEKG
KNLRVPEKVPFRMTPNIRTALGLTGVEGVFRTSCEHVLKVLRRGRETLLTLLEAFVYDPL
VDWTPGSEGGYTGAVYGGRQAWAIEAKQTRQSMEMDIALSMFAIRVAEMKGEWLKNRDEL
LSAFPKLENFLQDWKKAQHQLQIAETELQDACQEKALLEEALANPNHSLYTVPKRYEETT
VVKNTVMTTKEAVSEKLAECKKWHTVHCESLSTVCGAELAKWCADVSSDQSMDTLSVAPV
VEFLQSAGQGQLVQQCEHAESELANAVQQHRLTMRNCIELLTTYAAIVLQFGPTYREQNR
CFRWQQWLENLLSDFTSLKCIEIISDFRNLYGRESPDAIQSAISLNVQFQTVISEINTKV
VQ
NT seq
8646 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagagattctttagcagaaataaagagccgaggagagaaaaactcatccgaaca
agacgtgacgacgatgaacgtgtgcatggagatgaacctcccactcggcgtagctcttcc
gaacgaccaaattcagcacatgcctcttcatattcgagatataaagacaattttgtggaa
aaaccccgctcaactagtagggatagtcaaggcagtctcgtatttcgtcgacaggaacga
ggtaaactgcagtcgaacttttcaaagagttccagtggagaaatttcgccttgccgtgta
tcacacgccgatacaatgaggaatgaatcagctggacgattaagctacagttctcattac
aacagagcaaccaactcccgcgaaagagatttcgcatccaagcgttcaggtcatcttgat
aactgtcatgtcattgacgaaaacagacttaaaaccattcttcatcgtttattaagggat
gaagatcgagaaagacaagccactttgattcggcaattaaggatgatatttgaacattct
gaaaattataagattatccaagctaatagagaagagattatttcaacatttgaggatttt
attcaacttggtttaaattcagagcttaagcaagaattcgtttctgctgttggaacctta
ggtgctattttaggtcttaaagcaaaaagcttgcttgactgggagtttgctgttattagt
atgtccaaaagcgatgacataaggattttaattttaaagacagttctagaaatgttaaaa
attgatgcagaaaaaagaaatctagctgaacatgtgccgtttgtaatggcaagactgcag
tctgcattagaggtagctgatgtacctgaattgttaattgcaattgtgaatgtgatattt
gaaatttcaaatggatatcctaccgtgttttcaaagcattttagtgatactgtggatatt
cttattggttggcatattgatgctacacagcagcaatctgtaattgagtttacatcaaat
acattaattggcttccagcagttttggatatcagatataaattttactgctactctctta
ggtcagtttttagaagatatggaatcttatgctgagggtttgcccaagattaaaccacaa
cctaaaaagtctgttatgtttcttaaggaattggctcaatcaaaactaaattcttcagga
agtgtagaaagccaactttgttctcctgaagaaaatgtagctaaaataaaaagtttgatt
agggttttaattactgtgttaaaaagtattgaagatttaatagtacctgatgaaagtggc
cctatatcatggggatttgttgtacagatgctaaaaagttttttaaagtatattaaaata
accatggaatatcattactactgcgatttaatgacttcagctaatgaatgcctagatttg
cttttaaaattggcccagttacattccaaagatgctcttgatgaactgatgtcttttgtt
gatttactgcaagaaaagaaatccaatccccttagtgaatctcatcttgtatctattctt
cgaatgatgatacgttttgtaaaaactgttggaacttatcttcctgtgaagtttgttaca
aaattattttctccaacctcactatcacggcagcttcgcctctccccatcatcaaagatt
cagaaacttcttattgaactctatcatattgtcctagctgtgaaaaatgtccaaattgtt
gaagaattttacaaatgtataatgaatgatatagtggatgctcataatgcattgttaaaa
tcatctgaggaaaactccatatgctcctattacagcgaagtttctcttctactgagtata
tgtgcactggtagaaatagggaatataaaacattcattaataagaatgtttgccttgaaa
cccagtttctttgacttaatgataattcagctgaagccaacttctccagagttagctaaa
cgatttcctgcattgcagtcagctattttatatactttatattctcattgtcaaaggcac
tctcacttcgtgaatagtagtgctcttgtaaatccaaatgctgcatcaggatctccggta
tctacatctggaaacacttcgcctattatgactgatgttccaccaacttctcccagcagt
ggcaatttagaaaaagttattaagcttttaatagaccttcttgatggacctcataattca
tatgacagcagacttcttgctgcaaaatggtctgtggaaatattagagaatgtacagcga
catcttgttcgtttaattttgaacacatgttttgaagatctcttaaatgctaccttaaat
gcaggcttttcatatgatcctagtgtttgtaaaattgcttgtaagggtcttcatatcttc
ctaaagtcaacttcatcagtgcttccagaaactactctgcaaaggtgttatgacttatgt
atattaaagttaagtagtcatgatattgaggtacaggaacagtttgcctatcttctgtct
ctcctgcctttggatatagttctaatgggtagtacagctaatgttttcaaaggtggaagt
actcatagtgcagctaaagatgtggattcttcattgaagttgtatatgtctgtccatgat
gtatggtctgtatatagaggttacatgggacggtcatgtcctggcaacttctttagccat
cattttcgtacaatcacaaattatgttttgcaaggaaaagaaccacatgaaaagaaatgg
ttgcttaagttgtttcatagctgtcctcctcctgagcgtcatagcagaattgatttttta
atgagttatctagcgaataattcgttagcagttctgtggttttgggctgtatgggaagta
gcacaatcatgtgttatttcaaaattgcgtacaccattaggaaaaccccaggaaacattt
atggctatagaaggggctttaaaaagtgctgccaagttttctaagaataaagaggataat
ttttctagtgaatcaaaacatttgactcttctgagagttaatttattgctttctcttatg
gagcatttagaaaagctaatgtataatgcttatgaaggttgtgcagctgctttgccatca
cctccaaaaaatgttcgaacattttttaggactaacaaatcaacttgccatgaatggctt
agtcgtattagatctacagcagtagtagttgctgtgaatgcaggaaatcctgctgctgct
gtccgccatggatttgaactgctccaagaaataaagaatagtggaaattcgcaggtacca
gaatttgaaaatactctgtatgctgttgttaaagctcttattcaaatgcattgtcctgaa
gcagttttgggcttatatgtatggtgcaaggaatcatttaaccgtaaattaacgtggatt
aaagcttcggttgactgtgctgcaggaagattagtgcctatgaaatttgtgaactcgggg
ctcactttttgtgagtacgtttgttgctatcctgaggtacccgagggaagtagagataga
aacctccaaggcagacaaattgagcaaatgattgaagaccattgcctttgtcttcttgat
aatggacagaacatctacttccatgaatctacaaggacatttcacgctttagatctggct
ctctgttcaccatctctcctgcccttttgtacatttagtgttggaaattacctttatgat
ggtgatcttttttcccattttggttcactatatgttgatgacttgcagataagttgtcaa
ggtgtagatatgagatacgtggagagacagctgcagatcgctttgaataggattcaaaag
tggtcaaatggagagggctttatattttcaaaagagaagactagattgcttgtatgtggc
agattagattgtggctcaattgcatatggatctgctcaaccttctgttttagtgaaactt
aatccccatacatcatcaggctctgaggatcagtttgaaaatgctgctcatgaatattta
tgcattctgcaatccttgtcagaaaaaaacaagctaaatatgagtgaaagtggcattaat
aaacctcaagtagatatatatttgcattcatttttgatcaatcaggttatagattgctat
atgaatttgggaaactggtcagatgcagcaaaatgggcagagtttcttgaaaaagtgaaa
tttaatcagaatggactcagtgtcagtataccttggagctgcaataatgtaacttatttg
aggtgtttaacatcttttgatgaagtgtcatcaatcggaactaagaaagatttggctgca
tattttcatgacttatctgttatatcagaatcaaatgcaaattcatcttggactatggag
gaacaatttgctaaaacccagcaacttttgatgtcagttgctcttgaacatgaaaatagc
aataaatcatctgtacagttgaaaaaattaactgatgaaataaatgaagcaaaagatgaa
gttttgaaattgataaagttatcagcattaacttggcctccttgtattgaaccaaagcat
gctgcactttttatatctgcatccactttgcaattttcaaagaagacaaattcaaccttt
ttacgagacaatataaagcttgatgcatcagactgctatagttctactttaggctttctc
ctaacttgggaaaatatttggcatcatctcaattcagcttcaccaacagcaaaactgcaa
ggtggcttctttgacctgctaatgattactgcaagacttgctcgaaagcagcaaaattat
aaaatgtgttctaagcttataacaaaagctgcaagctatgtttgtaaaactgctcaaaat
tctgatttgattgattcgccgttatctggtgatgatgatgatgcaaaagatgtaaatttt
ttgaagaaaatgttgagaagtacttttagcgggaatcctagtgaaaaacttttgaaaatg
caaagggaaggtgccaaattactccactgccttggagagaatgattgttcgcatgaactt
cttttacacagtgtcactgttatttcaaattatcttaaagattcaaataaccagctttca
agtgtcaccattgatcaactctctgaattgaattcacgatctatgcttaatttggtaaaa
tatgtacagcaagatacaaaatctctgaatagctcttctcatgacaacagctggctgctg
ctattatacaatagtataaatgatctcaagtgctctggagagatttctggcataccaaag
aatttcataattgatctgccacaagaaaatgttgtcagtgacttagattaccttattggg
cagctattgcagctgagtatttaccagtgtccttcccttgcaaaatcttggtgcaatttt
gcttcgtggtgctatggatggggtaggaaagttgtaaacacatcctcgaatggttctgta
tttatatatcctgaagaagaagccaaaataatatctctgatgcctaatgctttgaaggaa
gacattgatattttactgggcattatcactagtttaaacagttcttcaggcggtgaatgg
gataatcaagaaatggattatactgaaaatggtgctgaagaaataagatggcagatttta
acaacttgcccatttcttttgaaagttgaagatagtgaaacagttattgagaacataata
gatatttggaaaggccttgtgactcgagcttattcatactatcgtttagctgctatgtct
tacttgcagtatttgcagttgaatggaaagagtccaaatgaagaaaagtctgatgatgat
aatgtaacagcaacacttcgtttactgagattagttgtgaaacatgcatctgaattgaga
gatgttttggaagatggtttagcagaaacacccacagctccttggagaggaataattcca
cagcttttctcacgtttgaatcatccggaaccttatgttaggcaaagcatttctgatctg
ttatgcagagtagcacaagctgctccacatttgattgttttcccagctgttgttggttct
ctgacactgaaagttggaccgcaacttcaagaagaagctgctggtttatttggtgcatat
ttttctgacagtattgaagacaatcctacatcacaagcagatggtagtcaagtctctgat
agagatgaattgcagcagccagttgtcatgttatcagatgatgaagattctgaggaagac
cgacagaaaactgctgtaatgcagaattgttttcatgctcttgtcgaaactcttggcagc
caagatgagcgaaccatttcagaagctaaaaatctgatccatgaacttcatagaataact
ttattatgggatgaattgtggttagggacattgaatatgcatcaaagcgaagttaacagg
cggttctcaaatttagagaaagaaatctgtaaagtcatgaataatacatatttaagcaaa
gaggaaaagaaggaaatagttaaagaaaagcataatgtctatgttaagcctacattattt
ctgttggaacaactgcagaaaataaccactcagcctccagaaacacctcatgaacagtgg
tttcagaaaacatttgagaaaccaatagaaaatgcactgaataagttaagaaatcctagt
gatccatcaaggcctcaagaaagttggtctgtttttaaacagctttatcagttgcttcaa
caaaaagtgcagcagcagtcacgttctcatctgagcatggatcagattagtcctgtatta
gcatctttgaaatctacagtgattcctatgcctgggattaataaagcaagtggtgttatt
actgtgcagtctgttcataatattgtgtctattttgcctacaaaaacaaaacctaagaaa
ttagcattcattgggtcagatggtcaaaggtatacttatctcttcaaaggtttggaagat
ttgcatttggatgaaaggataatgcagtttctttctattgtaaacaacatgttttctagg
agcaaaagacatggaaaagaagtgtattatgctcgacattattctgtgacgccacttgga
cctcgttcaggtctcattcagtgggttgatggtgcaacaccactctttggcctctacaaa
aggtggcaacaaagggaagcaaattctgcagctgttaaaggacagaattctagtggaaat
gtgggtgttgttctccgtccttctgaaatttattacaataaactgactccacttttgaaa
gaaaaaaatttaaattgtttggataatcgcaaagagtggcctttgtcagtgttactggaa
gttctaaatcaacttatggaggaaactccaaataatttacttgcaaaagaactttggtgc
tcctgcagcagtgctcttgaatggtggaatgttactcaaacttataatcattctacagct
gtgatgtctatcataggctatataattggtttaggtgatcgtcatttagacaatgttctt
gtggatctttctacaggagaggtagttcacattgattataatgtttgctttgaaaaagga
aaaaatcttagagttcctgaaaaagttccttttagaatgacaccaaatattaggacagct
ttaggtcttactggagttgaaggagtattcagaacatcttgtgagcatgtactaaaagtc
ttgagaagaggccgtgaaacactgctgactttgcttgaagcatttgtgtatgatccttta
gttgattggacacctggcagtgaaggaggttacacaggtgctgtttatggaggaagacaa
gcatgggccattgaagctaagcagacacgtcaaagcatggaaatggatattgcattatct
atgtttgctattcgtgttgcagaaatgaaaggggaatggctgaaaaatagggatgagctg
ctctcagcatttccaaagctagaaaattttcttcaggactggaaaaaggctcagcatcaa
cttcagattgctgaaactgaacttcaggatgcttgccaagaaaaggctcttttagaagaa
gctttagctaatccaaatcatagtttatatacagttccaaaaaggtatgaagaaactaca
gttgtcaaaaatacagtgatgaccactaaagaagctgtgagtgagaagctagctgagtgc
aaaaaatggcatactgtccattgtgaatctttgtctactgtatgtggagcagaacttgct
aaatggtgtgcagatgtatcgagtgatcagagcatggatactttgtctgtagcacctgta
gtagagtttctgcagtcagctggccaaggtcagcttgttcagcaatgtgaacatgctgag
agtgaacttgctaatgctgttcagcagcatagattgactatgaggaactgcattgaactt
ctcacaacttacgctgctattgttttacagtttggacctacctatagagagcaaaataga
tgttttagatggcagcagtggctagagaatttgctttctgattttacatctttgaagtgc
attgaaataatatctgattttcgtaacctctatggtagagaaagtcctgatgcaattcag
tctgctatttctctgaatgttcaatttcagacagtgatatcagaaattaatactaaagtt
gttcaa
DBGET
integrated database retrieval system
