Stegodyphus dumicola: 118202967
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Entry
118202967 CDS
T07385
Name
(RefSeq) cleavage and polyadenylation specificity factor 73-like
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118202967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdm03021
]
118202967
03019 Messenger RNA biogenesis [BR:
sdm03019
]
118202967
Transcription machinery [BR:
sdm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118202967
Messenger RNA biogenesis [BR:
sdm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118202967
U7-dependent histone pre-mRNA processing factors
118202967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_3
Lactamase_B_2
Gp58
YbaB_DNA_bd
Motif
Other DBs
NCBI-GeneID:
118202967
NCBI-ProteinID:
XP_035231094
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MAAKKKVESQIPPEESDLLVVKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGIDAL
PFVDNIEPEEIDLLLVSHFHLDHCGALPWFLLKTPFKGKCFMTHATKAIYRWLLADYIKV
SNIGTEQMLYSEADLDASMGKIETVNFHEEKEVNGVRFWCYNAGHVLGAAMFMIEIAGVK
VLYTGDFSRQEDRHLMAAEIPGLQPDVLIIESTYGIHIHEKRDEREARFTGLVHDIVNRG
GRCLIPVFALGRAQELLLILDEYWSNHPELHDIPIYYASSLAKKCMAVYQTYINAMNDKI
RKQIAINNPFVFKHISNLKSIDHFDDIGPCVVMASPGMMQSGLSRELFESWCTDPKNGVI
IAGYCVEGTLAKHILSEPEEITTMTGQKLPLKMSVAYISFSAHTDYQQTSEFIRILKPPH
IVLVHGEQNEMGRLKAAIIREYEDDQDAHIEVYNPRNAQGVELYFRGEKTAKVMGSLAVQ
PAEAGRILSGVLVKRNFSYHLLAPSDLSKYTDMIMSTVSQRLSVPYTGSLQVLHFYLNQL
SGDAKLIPDYKKFGGKLILQVFDAISISQESKVVVLEWTSSPVNDMYADAVVATILKAEK
SDYTSKTLPPVVKVDKMHFTECLMEMLAEMFGEDSVSKIVRGEKLTVTVNNKCAVINVRS
LEVKCEDDEVLQQMVTTAVVKLHNCLIPQKVPIDTFAAI
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaagaagaaagtagaatctcaaattccgccggaagaaagtgatttattagta
gtaaaacctcttggagctggccaagaagtaggacgatcatgcattatgttagaattcaaa
ggaaagaagataatgttagattgtggtattcatcctggattatcaggtatagacgcttta
cctttcgtagacaacattgaacctgaagaaatagatttacttctcgtgagtcatttccat
ttagatcactgtggtgctctgccttggtttttactgaaaactccatttaagggaaaatgt
tttatgactcacgctacaaaagctatatatcggtggcttttagccgattacatcaaagta
agcaacatcggcacagaacaaatgttgtacagcgaagccgatctcgatgccagcatggga
aaaatagaaactgtaaacttccacgaagagaaagaagtgaacggtgtgagattttggtgt
tataatgccggccatgtattgggagcggctatgttcatgattgaaattgcaggcgttaaa
gttttgtacactggtgatttttcgcgacaagaagatcgccatttgatggcagccgagata
ccaggccttcaaccagatgtacttattatagaatctacatacggaattcatattcatgaa
aaacgagatgaacgtgaagctcgcttcactggtcttgttcatgacattgtgaaccgtgga
ggaagatgtctcattccagtttttgcacttggcagagcccaagaactattgctgatatta
gatgaatactggtctaatcatccagaattgcatgatattcccatttattatgcatcatct
ttagcaaagaaatgtatggctgtgtatcaaacttacatcaatgctatgaatgacaaaata
cgaaagcagattgctataaacaatccatttgtatttaagcatatttccaatttgaaaagc
atcgatcattttgatgacataggtccatgtgtggtgatggctagtcccggaatgatgcaa
agtggtctgtcgcgtgaactatttgaaagttggtgtacagatcctaaaaacggagtgata
attgctggttattgcgttgagggtacactagcaaagcatatcctgtctgaaccagaggag
ataacaacaatgactggtcagaaattacctctaaagatgtctgttgcatatatatctttt
tccgctcacacagattatcaacagacaagtgaattcataagaattctgaaaccacctcat
attgttcttgtgcatggtgaacagaatgagatgggaaggctgaaagccgccattattcga
gaatatgaggatgatcaagatgcccacatcgaagtttacaatccgaggaatgcacaaggt
gtcgaattatatttccgaggagagaaaactgccaaagttatgggttctttagctgttcag
ccagctgaagcgggacgtattttatctggtgttttggtaaagaggaattttagttatcac
ctcttggcaccttctgatctctctaaatatacggacatgataatgagtactgtgagtcaa
agactaagtgttccatatactggcagtcttcaggtcctgcatttttatctgaatcagttg
tcgggagatgccaaactcattcctgattataagaaatttggagggaaactcatattgcaa
gtttttgatgcaatatcaatatcccaagaatcaaaagttgttgtactggaatggacttcc
agtccggttaatgacatgtatgctgatgctgtcgttgcaaccatccttaaagctgaaaaa
tcggactatacatccaagaccctgccacctgtagtcaaagtggacaaaatgcattttaca
gaatgtcttatggagatgctggcagagatgtttggagaggattctgtgagtaagattgta
cgaggtgaaaaattaactgtaactgtgaataataagtgtgccgttataaatgtccgtagt
ctcgaagtgaaatgcgaagatgatgaagtactgcaacagatggttacgacggcagtggta
aaactacataactgtcttatacctcaaaaagttcccatagatacatttgcagctatttag
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integrated database retrieval system
