Stegodyphus dumicola: 118203678
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Entry
118203678 CDS
T07385
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03018
RNA degradation
sdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118203678
09123 Folding, sorting and degradation
03018 RNA degradation
118203678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdm03019
]
118203678
03041 Spliceosome [BR:
sdm03041
]
118203678
Messenger RNA biogenesis [BR:
sdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118203678
mRNA degradation factors
5'-3' decay
Lsm complex
118203678
Spliceosome [BR:
sdm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
118203678
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
118203678
NCBI-ProteinID:
XP_035231847
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MAIIVVKCVVSVLILWVIVLVEFLCTLKFYKVLVLFSMASTLESYVNHTVSIITADGRNI
VGTLKGFDQTINLILDESHERVYSSSQGIEQVVLGLYIVRGDNVAVVGEVDDELDQRLDL
TNIKAEPLNPVVH
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atggcaataatagtagtgaagtgtgttgtgtctgttttgattttgtgggtgatcgtgctc
gtagaatttttgtgcacattgaaattttacaaagtgcttgttttgttcagtatggcttcg
acgttggaaagttacgttaatcatactgtgtctattataactgctgatggaagaaacatt
gtcggtaccctcaaaggttttgatcaaacaattaatttgatccttgatgaaagccatgaa
agagtttatagctcctctcaaggcatagaacaagtagttcttggtttatatattgtgcgt
ggagacaatgtagctgttgttggagaagttgatgatgaactagatcaaagattagattta
acgaacatcaaagcggagccattgaatcctgttgtacactga
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