Stegodyphus dumicola: 118204719
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Entry
118204719 CDS
T07385
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118204719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdm03041
]
118204719
03009 Ribosome biogenesis [BR:
sdm03009
]
118204719
Enzymes [BR:
sdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118204719
Spliceosome [BR:
sdm03041
]
Complex A
U2 snRNP components
U2 related factors
118204719
Complex B
118204719
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
118204719
Ribosome biogenesis [BR:
sdm03009
]
Eukaryotic type
90S particles
Helicases
118204719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
WHD_HA2
AAA_19
AAA_22
nSTAND3
SRP54
Flavi_DEAD
Cas3-like_C_2
nSTAND_NTPase5
PhoH
ABC_tran
AAA_30
T2SSE
AAA_25
TsaE
Motif
Other DBs
NCBI-GeneID:
118204719
NCBI-ProteinID:
XP_035232911
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MDGNDIDELVEEHIQKLTTKELVELHSLSEDYDIPSKKGRLDVDEAKRKTKEFDDSSPRR
LKLENNGEDIERRKDKENVINTPYLEPPVAAPTTGTVKSINQFNGLPHTPHYYELFKKRI
TLPVWEYKPKFFEMLKKNQIMVLVGETGSGKTTQIPQWCVEWLRENGIRRGVACTQPRRV
AAMSVAARVAEEMDVMLGQEVGYSIRFEDCSSMKTILKYMTDGMLLREAMSDPLLEAYGV
VLLDEAHERTLATDILMGVLKQVVSKRSDMKIVVMSATLDAGKFQNYFDNAPLMTVPGRT
HPVEIFYTQEPERDYLEAAIRTVIQIHMCEETEGDILLFLTGQEEIEEACKRIKRETDSL
SAEVGDLKCIPLYSTLPPNLQQKIFEPPPPNKPSGAIGRKVVVSTNIAETSLTIDGVVFV
IDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKVEMQD
QTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLQSLNDEGDIT
DLGAVMAEFPLDPQLAKMLISSCDYNCSNEILSITAMLSVPQCFVRPNEAKKAADDAKMR
FAHIDGDHLTLLNVYHAFKQNHEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFSLKRT
STEFSSKDYYINIRKALVAGFFMQVAHLERTGHYLTIKDNQVVQLHPSTCLDHKPEWVVY
NEFVLTTKNYIRTVTDIKPEWLLKIATNYYDISNFPACEAKRQLEFLANKMQSRQYQEGF
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaatgacatcgatgagctagtggaagagcatatacagaagctgaccaccaaa
gagcttgtggagctgcattctctttcagaagactatgatatcccgagcaaaaaaggaagg
cttgatgttgatgaagccaagaggaaaaccaaagaattcgatgattcttctcctaggagg
ctaaagctggagaataatggtgaggacattgaaagaagaaaagacaaagaaaatgtaatt
aatactccttatttagaaccaccagtagcagctccaactactggtactgtaaagtctatc
aaccagtttaatggtttgccgcatacacctcattactatgagcttttcaaaaaaaggata
acattgccagtatgggaatacaagccaaaattttttgaaatgctgaagaaaaaccagatt
atggttctagttggtgaaacaggatctgggaaaacgacacagataccacagtggtgtgtt
gaatggttgcgggagaatggaattcggcgaggtgttgcttgcacacagccccggagagtg
gcagccatgagtgttgcagctcgagttgcagaggaaatggatgtcatgttgggtcaagaa
gttggttatagtatccgttttgaggattgctcttctatgaagacaatactaaagtacatg
actgatggtatgttactgagggaggctatgagtgacccattactagaagcctatggtgta
gttcttcttgatgaagctcatgaacgtactctagcaacagatattttaatgggtgtgcta
aagcaagttgtatcaaagcgttcagacatgaaaatagtagtaatgagtgctactttggat
gctggaaaattccagaattattttgacaatgcaccattaatgactgtgccaggcagaaca
catcctgttgaaatcttttatacccaagagccagaaagagattatttggaagctgctatt
cgaacagttattcaaatacacatgtgtgaggaaacagaaggagatatccttctttttctt
acaggacaagaggaaattgaagaggcctgcaagagaataaaacgagaaactgatagtttg
agtgcagaagtaggagacctgaaatgcattccattatattcaactttgccgccaaacttg
cagcagaagatatttgaaccccctccaccaaataaaccaagtggtgccattggtcgaaaa
gtagtagtttccactaacatcgcagaaacatctctgacaattgatggtgttgtatttgtc
attgaccctggctttgccaaacagaaagtatacaatccaagaataagagttgaatcctta
cttgtatcaccaataagtaaagctagtgcacagcagagagctggtcgtgctggaaggact
cggccaggaaagtgtttccgattgtacaccgaaaaagcttacaaggtagaaatgcaagat
caaacttatcctgaaattctacgatcaaatcttgggactgttgtgttacaactcaaaaaa
cttggaattgatgacctggtgcattttgattttatggaccctccagctccagaaacgtta
atgagagcattagaactattaaattatttacaaagcttgaatgatgaaggagacattaca
gatcttggagcagtgatggcagaatttcctttggatcctcagttggcaaaaatgctgatt
tcttcctgtgactacaactgttcaaatgaaatactctcaataacagctatgttatcagtt
ccacagtgctttgtgaggcctaatgaagccaagaaagcagcagatgatgcgaagatgagg
tttgcccacatcgatggtgatcacttgaccttgcttaatgtataccacgccttcaagcag
aatcatgaagatcctcagtggtgctatgacaactttgtgaactatcgatctttgaagagt
gcagataatgtacggcaacaactgtctaggattatggacaggttcagtcttaagaggacc
tctacagagttcagtagtaaagactattacattaatattaggaaagcattggtagctgga
ttctttatgcaggttgctcatttggaacgcactggacattatctaaccattaaagataat
caagttgtacagcttcatccttccacatgtttagaccataagcctgaatgggttgtttac
aacgaatttgtattgacaaccaaaaactacattcgaactgtcacagatattaaacctgag
tggctattgaaaattgcaacaaactattatgatattagtaatttcccagcctgtgaagcg
aagaggcaattagaatttcttgcaaataaaatgcaatctcgtcaatatcaagaagggttt
taa
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