Stegodyphus dumicola: 118204874
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Entry
118204874 CDS
T07385
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
sdm
Stegodyphus dumicola
Pathway
sdm04140
Autophagy - animal
sdm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118204874
04148 Efferocytosis
118204874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdm04131
]
118204874
Membrane trafficking [BR:
sdm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118204874
Hops complex
118204874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-C3HC4
zf-RING_2
Beta-prop_EML_2
zf-rbx1
zf-C3H2C3
FAST_1
zf-RING_5
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
118204874
NCBI-ProteinID:
XP_035233063
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MAFLQWRRFNFFEKEVVKDIESSQVFEKLKDINVTCTTSGRGQIVLGDVEGNIFFLNRQF
QLISFKAYELNVSHIEQLRLNPILVSVGADEPGINPLIKVWNVEKPDRLGKPLCMRIIRP
QSVTSSVTAFAVHENMNFLAVGFADSSILFARGDITRERQSKQKVFKVSSSALTGLVFRT
QGKQVFLFAATTNEIYSFNLSVKDKETKILLDTHGCSPKCSVISDAKQDHQFVIGRHDAV
YFYQHDGRGPCLAFEGEKILLHWFRSYLVVVGKDTKAVHSSAITSPPIEMNIVTVYDIQN
KFIAYSAPLPAVVDIISEWGSLYVLSQDGKLFNLQEKDTQTKLDMLFKKNQYALAISLAK
SQQYDEDGLIDIFRQYGDHLYTKGDHDGAIAQYIKTIGKLEASYVIRKFLDAQRIHNLTA
YLQALHKKDLATEDHTTLLLNCYTKLKDISKLDEFIMTKDHEIHFDVETAMKVCRQAGYY
KHALYLAEHHDQHEWYLKILLEDLKDYDKALKYIAKLDFEAAEGNMKAYGKVLMTEVPEQ
TTQLLKRLCTDYSSSESISEKCCSSNPEEFIHIFVNNSERLLEFLEHMIKIRPTSSSLVY
NTYLELCLKTYGKETNPVAKKKIELKIMDMLRNSEASYNINQALVLCQMSDFKSGILHLY
EKAKLYQQIIFYHIENRDNDAIMKTCERFGSNDPNLWVQALWFFCQQERNQKPYILTILN
EVEKNNLLSPILVVDIMAKSHTATLDLIKDYIIRYLQKENDQISEDERLIKQYREETEKM
RNQMEELRTNAKIFQVSKCSGCTHQLELPSVHFLCGHSYHQQCFESYSAEHDSECPLCLT
ENQKVLGIIRAQEQNKDLHEQFHHQLERADDGFSVVADYFGRGVFNKVTIVTDSARPAAK
SVDSLNPFYADM
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcttttttacagtggaggcgattcaacttttttgagaaggaggttgttaaagatatt
gaatcttcacaggtatttgaaaaactgaaagatataaatgttacttgcacgacaagtggg
aggggacaaatagtgttaggagatgtagaaggaaatattttctttttaaatcgacagttc
cagttaatatcctttaaagcatatgaactaaatgttagtcatatcgagcaactaagatta
aatccaattctagtttccgtaggtgcagatgaaccaggcataaatcctctgatcaaagta
tggaatgttgaaaaacctgacagactaggaaaacctttatgtatgagaattataaggcct
cagagtgttacatcatcagttacggcttttgcagtgcatgagaatatgaattttctggct
gttggatttgctgacagcagcatcttatttgctagaggagacatcacaagagaaagacag
agtaagcaaaaggtattcaaagttagttcaagtgccttgactggtctcgtatttaggaca
caagggaaacaggtatttctgtttgctgctacaacaaatgaaatatactctttcaatctc
tctgtgaaagataaagaaacaaaaattcttctcgatactcatggatgctcgcctaaatgt
tctgttatcagtgatgctaaacaagatcatcaatttgtaattggacgtcatgatgcagtt
tacttttatcagcatgatggcagagggccatgcctagcatttgaaggggagaaaatatta
ttgcattggtttagaagttatttagttgttgttggaaaggatactaaagctgtgcattct
tctgctataacttcacctccaatagagatgaatattgttacagtgtatgatatacagaac
aaatttattgcttattctgcaccactgcctgctgttgtagacattatatctgaatgggga
tcattatatgttctttcccaagatggaaagctatttaatttacaagagaaggacactcaa
actaagcttgacatgctatttaagaaaaatcagtatgcacttgctataagtttggctaaa
agtcaacagtatgatgaagatggtctgatagatatatttcggcagtatggagatcatttg
tacactaagggggatcatgatggagctatagcacaatacatcaaaaccattggaaagctg
gaagcctcatatgttattcgaaaatttcttgatgcacagagaattcacaatttaacagct
tatttacaagctcttcataaaaaagatttagcaactgaagatcatacaacattattactc
aactgttacacaaagttgaaggacatatcaaaacttgatgaatttatcatgaccaaagac
catgaaattcattttgatgtcgaaacagctatgaaagtttgccggcaagcaggttattat
aaacatgctttgtatttagctgaacatcatgaccaacatgaatggtatttaaaaattctt
ctcgaagatctgaaagattacgataaagcattaaagtatatagcaaaattagattttgaa
gcagctgagggaaatatgaaagcatatggtaaagtacttatgacagaagtaccagagcaa
acaacacaattgctaaaacgcttgtgtacagattacagctccagtgagtcaatttctgaa
aaatgttgttcttcaaatccggaagaattcatacatatttttgtaaacaattcggaaagg
ttattggaatttcttgaacatatgataaaaatccgtcccacatcatctagtcttgtgtat
aacacatatcttgaattatgtcttaaaacgtatggcaaagaaactaatcctgtagctaaa
aagaaaattgaattaaaaataatggatatgttgcgaaattctgaagcaagttacaatatc
aaccaagctcttgttttatgtcagatgagtgatttcaaatctggtatcttgcatttatat
gaaaaagcaaaactgtatcagcagattattttttatcatatagaaaatagggacaatgat
gctataatgaagacctgtgagcgatttggaagtaatgatccaaacctctgggttcaagcc
ctgtggtttttctgtcagcaggaaagaaatcagaagccctacatacttaccattctgaat
gaagttgagaaaaataatttgctatcacctatcttagtagtagatataatggcaaagagt
cacactgctactttagatttaattaaagactacataataagatatttacaaaaagaaaat
gatcaaatttcagaagatgagcgtttaattaaacagtacagagaagaaactgaaaaaatg
agaaatcaaatggaagaactgaggactaatgctaaaatatttcaagtttccaaatgtagt
ggctgtacccatcagttagaactaccttctgtacattttctttgtgggcattcctatcat
cagcagtgttttgagagttacagtgctgagcatgattcagaatgcccattatgtttaact
gaaaaccagaaagtgctagggattataagagctcaagagcaaaataaagaccttcatgag
cagtttcatcatcagttggaaagagctgatgatggattttcagtagttgctgattatttt
ggacgaggtgtattcaataaagtcacaattgttaccgattcagctcgtcctgctgctaaa
agtgttgacagtcttaatccattttatgcagacatgtag
DBGET
integrated database retrieval system
