Shewanella denitrificans: Sden_0001
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Entry
Sden_0001 CDS
T00344
Name
(GenBank) chromosomal replication initiator protein DnaA
KO
K02313
chromosomal replication initiator protein
Organism
sdn
Shewanella denitrificans
Pathway
sdn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sden_0001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdn03032
]
Sden_0001
03036 Chromosome and associated proteins [BR:
sdn03036
]
Sden_0001
DNA replication proteins [BR:
sdn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sden_0001
Chromosome and associated proteins [BR:
sdn03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Sden_0001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DnaA
Bac_DnaA_C
DnaA_N
Hda_lid
IstB_IS21
AAA
AAA_14
AAA_22
Kinesin
AAA_16
ATPase_2
AFG1_ATPase
AAA_19
KAP_NTPase
DUF7721
NACHT
BLOC1S3
Motif
Other DBs
NCBI-ProteinID:
ABE53298
UniProt:
Q12TC8
LinkDB
All DBs
Position
10..1398
Genome browser
AA seq
462 aa
AA seq
DB search
MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGDTLVLYAPNRFVLDWVRDKYINIIN
QFFTEQMGSNAPKLRFDIGSRPSARTVQPAPAAPRPTTGHTQTKARVGTAFNIQAEPMAN
ANHRSNINPTYQFDNFVEGKSNQLGKAAAMQVAENPGGAYNPLFLYGGTGLGKTHLLHAV
GNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDR
SQEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAI
LMRKAQESGINLPDEVAFFVAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRD
LLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQVAMALSKELTNQSLPEI
GDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtggcggtttcactttggcaacaatgtatcggaagactacaagatgagttatcggctcag
cagttcagtatgtggatccgtccgttacaagctgaaatggatggcgatactctagtgcta
tatgcacctaatcgttttgtactcgattgggttagggataagtacatcaatattatcaat
cagttttttactgagcagatgggtagtaatgcccctaaactgcgtttcgatattggtagt
cgtccttctgctcgcactgtccagccagccccagccgctcctagacctacaacaggccac
acccagactaaagcccgcgttggcacggcatttaatatccaagccgagcctatggccaat
gctaatcatcgtagtaacatcaaccccacttaccagtttgataacttcgttgaaggtaaa
tcaaaccaattaggtaaagctgcagcgatgcaagtggctgagaatccaggcggcgcttac
aacccattatttttgtatggtggtactggtttaggtaaaacccacttattacatgctgtg
ggtaatggcattattaagaataatcctaatgccaaagtggtgtacatgcactcagaaaga
tttgtgcaggacatggttaaagccctacaaaataacgccatcgaagaatttaagcgttat
tatcgcagtgttgatgccttgtttatcgatgacattcaattctttgccaacaaagacaga
tcccaagaagaattcttccatacctttaatgcgttattagaaggtaatcatcagatcatc
ttaacctctgatagatatccaaaagagatcgacggcgttgaagatagattaaagtctcgc
tttggttggggactgacagtggctatcgagccaccagaattagaaacccgtgtggcgatc
ttgatgcgtaaagcccaagagagcggcattaatttacccgatgaagtggcctttttcgtc
gctaagcgtttgcgctctaatgtgcgcgaattagaaggggcattaaatagggttatcgct
aacgcaaactttactggcagacctattaccatagattttgtccgtgaagccttaagagat
ttgttagcgctacaagaaaaattagtaacaatagacaatatacaaaagactgtcgccgag
tattataagatcaagatggctgatatgttgtctaagcgacgttcacgtagtgtggcaaga
ccaagacaggttgccatggcgctttcaaaggaactcaccaatcaaagtttaccggaaatt
ggtgatgcatttggtggtcgcgaccatacgactgtattgcatgcatgccgcaaaattgca
caattacgtgaagaaagtcatgacattaaagaagattatgctaatttgattagaacttta
tcttcttaa
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