Shewanella denitrificans: Sden_0008
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Entry
Sden_0008 CDS
T00344
Name
(GenBank) Glycine--tRNA ligase
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sden_0008
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdn01007
]
Sden_0008
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_0008
Enzymes [BR:
sdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
Sden_0008
Amino acid related enzymes [BR:
sdn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Sden_0008
Transfer RNA biogenesis [BR:
sdn03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Sden_0008
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
ABE53305
UniProt:
Q12TC1
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All DBs
Position
complement(11263..13347)
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AA seq
694 aa
AA seq
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MKFENLLIEIGTEELPPKSLRTLADSFLANFSDELVKADLPFTAATWYAAPRRLALSITG
LAVAQADKVVEKRGPAVSSAFDADGNPTKAAQGWARGNGITVEQAERLVTDKGEWLVHQA
KVVGVQTNSLIAAMAQRALDKLPIPKPMRWGANSTQFIRPVHTVTMLLGSELIGGELLGI
KSDRIIRGHRFMGQASFQLDHADNYLSALKEQGKVLADYQLRKAIIKADAEAAAAKIGGV
ADIQEDLLEEVASLVEWPIVLTASFEEKFLNVPAEALVYTMKGDQKYFPVFDKSGKLLPN
FIFVTNIESKDPQQIISGNEKVVRPRLADAEFFFNTDKKHSLASRLSSLETVVFQKQLGT
LKARAERISQLAGFIATELNNNNLASSSVDAARAGLLSKADLMTNMVMEFTDTQGTMGMH
YARLDGETEAVAIAIEEQYKPKFSGDTVPTASVSCAVALAEKLDTLVGIFGIGQAPKGAA
DPFALRRAAIGILRIIVENKLPLDLVDLIAKAQALHGTNLTNGNTSEDVLEFLMARFRSW
YQDKGIQVDVILAVLARRPTRPADFDSRVNAVSHFRGLEASTALAAANKRVSNILAKVEG
ELPANVTPSLLTETAEKALAEQLASLQPKLAPLFATGDYQQALTLLAELRESVDQFFEDV
MVMADDEALKNNRLALLNNLREQFLHVADISLLQ
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaaaacttactcatagaaattggtaccgaagagttaccgccgaaatcactg
cgtaccttggccgattctttcctcgctaacttcagtgatgaactggtaaaagccgatttg
ccgtttaccgcagcaacttggtatgcggcccctcgccgcctagcattaagcatcacaggt
ctagccgtagctcaagccgacaaagtggttgaaaaacgtggcccagctgtgagttcagca
ttcgatgcagacggcaatccaactaaagcagcccaaggttgggcccgtggtaatggcatt
actgtcgagcaagctgagcgcttagtaacagataaaggcgaatggttagtacatcaagct
aaagtggtgggtgttcagactaacagcctgattgccgctatggcccaacgtgcattagac
aaattacctatccctaagccaatgcgctggggtgccaatagcacccaatttattcgtcca
gtacacacagtgactatgctattaggcagcgaattaattggcggtgaactattaggtatt
aaatcggaccgtatcattcgtggtcaccgctttatggggcaagccagttttcagctagat
cacgccgataactatttaagcgccctaaaagagcaaggcaaggtactggctgattaccag
ctacgtaaagctatcattaaagctgatgctgaagcggcagcggctaagataggcggtgtg
gctgatattcaagaagacttgttagaagaagtcgcctccttggttgaatggccaatcgtg
ctcacggcaagctttgaagaaaaattcttaaatgtgcctgctgaagccttggtgtacacc
atgaagggcgatcagaaatacttcccagtatttgataagtcaggcaaattactgcctaac
tttatcttcgtgaccaacattgaatcaaaagatccacagcagattatttctggcaatgag
aaagtggttcgccctcgtcttgccgatgccgaattcttctttaacacagataaaaagcac
agcttggcatcacgccttagcagcttagaaactgtggtattccaaaaacaactgggtacg
ctaaaagcgcgcgccgagcgtatatcacagctcgcaggatttattgcgactgagttaaat
aacaataatcttgccagtagtagtgtcgacgccgctcgagcaggcttgttatccaaagcc
gatttaatgactaatatggtgatggagtttaccgatactcaaggcaccatgggcatgcat
tatgcgcgcctagatggtgaaactgaagcggtagccattgccattgaagagcaatataaa
cctaagttctctggcgatactgtgccaacagcgagtgtctcttgtgcggtcgccttagcc
gaaaaacttgataccttagtaggtatttttggtattggtcaagcacctaaaggcgctgcg
gatccgttcgcacttcgccgcgccgccattggtatcttacgtattattgttgagaacaaa
ctgccgctagatttagtcgaccttattgctaaggcgcaggcgcttcacggcactaacctc
accaatggcaataccagtgaagatgtactggaatttttaatggcacgtttccgtagctgg
tatcaagataaaggcattcaagtggatgttatcttggcagtattggctcgtcgccctacg
cgtccagcggactttgacagccgcgttaatgcggtatcacacttccgtggtttagaagcc
tctaccgcacttgcagcagcaaacaaacgcgtgtctaacatcttggctaaggttgagggc
gaattgcctgctaacgtgaccccaagcctgctaaccgaaactgcagagaaagccctagcc
gagcaattagcaagcttgcaacctaagctagcgcctttgtttgcaacaggtgattatcag
caagcactgacattattggcagagcttcgtgaaagcgtcgatcaattcttcgaagatgta
atggtaatggcagatgatgaagccttaaagaacaaccgtttagctttgttaaacaacttg
cgtgagcagttcttgcacgttgccgacatttcattgttgcaatag
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